RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
SNCAIP-203ENST00000379538 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-203ENST00000379538 N4BP2Q86UW6 1770 aaPredicted RBP16.27■□□□□ 0.19
SNCAIP-203ENST00000379538 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
SNCAIP-203ENST00000379538 PGBD1Q96JS3 809 aa16.27■□□□□ 0.19
SNCAIP-203ENST00000379538 SPATA32Q96LK8 384 aa16.27■□□□□ 0.19
SNCAIP-203ENST00000379538 TFCP2Q12800 502 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 C11orf57Q6ZUT1 292 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 AACSQ86V21 672 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 ZNF446Q9NWS9 450 aa16.26■□□□□ 0.19
SNCAIP-203ENST00000379538 BTAF1O14981 1849 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 COL15A1P39059 1388 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 FTOQ9C0B1 505 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 GREM2Q9H772 168 aa16.25■□□□□ 0.19
SNCAIP-203ENST00000379538 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 SKILP12757 684 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 PROM2Q8N271 834 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 PAXBP1Q9Y5B6 917 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 SNAP23O00161 211 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 JAK2O60674 1132 aa16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 EDC3Q96F86 508 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-203ENST00000379538 BRWD3Q6RI45 1802 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 CHGBP05060 677 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 TIMM10P62072 90 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 NHSQ6T4R5 1651 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 TBC1D9BQ66K14 1250 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-203ENST00000379538 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 ZBTB9Q96C00 473 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 CLSTN2Q9H4D0 955 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 RBM8AQ9Y5S9 174 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 ZNF397Q8NF99 534 aaPredicted RBP16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
SNCAIP-203ENST00000379538 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
SNCAIP-203ENST00000379538 RXRBP28702 533 aa16.21■□□□□ 0.19
SNCAIP-203ENST00000379538 PDE4CQ08493 712 aa16.21■□□□□ 0.19
SNCAIP-203ENST00000379538 SBF2Q86WG5 1849 aa16.21■□□□□ 0.19
SNCAIP-203ENST00000379538 CCDC69A6NI79 296 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 NECTIN1Q15223 517 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 SYCP1Q15431 976 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 ATG9AQ7Z3C6 839 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 TTLL11Q8NHH1 800 aa16.21■□□□□ 0.18
SNCAIP-203ENST00000379538 NUP98P52948 1817 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 ERVV-1B6SEH8 477 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 ITGA6P23229 1130 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 COPRSQ9NQ92 184 aa16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 SH2B1Q9NRF2 756 aaPredicted RBP16.2■□□□□ 0.18
SNCAIP-203ENST00000379538 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 CAPN2P17655 700 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 IQCB1Q15051 598 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 CCDC57Q2TAC2 916 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 DBNLQ9UJU6 430 aaKnown RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 AOX1Q06278 1338 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 APBA3O96018 575 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 CCZ1BP86790 482 aa16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 CCZ1P86791 482 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 ZSCAN31Q96LW9 406 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-203ENST00000379538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-203ENST00000379538 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
SNCAIP-203ENST00000379538 ERFEQ4G0M1 354 aa16.18■□□□□ 0.18
SNCAIP-203ENST00000379538 GORABQ5T7V8 394 aa16.18■□□□□ 0.18
SNCAIP-203ENST00000379538 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms