RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 GINS2Q9Y248 185 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 PDE1AP54750 535 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 NPATQ14207 1427 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
LINC00654-201ENST00000379053 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
LINC00654-201ENST00000379053 PPP1R14CQ8TAE6 165 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 GPCPD1Q9NPB8 672 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 SDSP20132 328 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 ITGA6P23229 1130 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 KAT6BQ8WYB5 2073 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
LINC00654-201ENST00000379053 MBD4O95243 580 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 MSANTD4Q8NCY6 345 aa12.41□□□□□ -0.42
LINC00654-201ENST00000379053 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
LINC00654-201ENST00000379053 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 KRT2P35908 639 aa12.4□□□□□ -0.42
LINC00654-201ENST00000379053 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 GSDMDP57764 484 aa12.4□□□□□ -0.42
LINC00654-201ENST00000379053 MARCKSP29966 332 aaPredicted RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.42
LINC00654-201ENST00000379053 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
LINC00654-201ENST00000379053 ZNF165P49910 485 aa12.4□□□□□ -0.42
LINC00654-201ENST00000379053 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
LINC00654-201ENST00000379053 DHX58Q96C10 678 aa12.4□□□□□ -0.43
LINC00654-201ENST00000379053 EP400NLQ6ZTU2 488 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 MCM7P33993 719 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 PPIP5K2O43314 1243 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 SPAG1Q07617 926 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 PDE8AO60658 829 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 ZNF790Q6PG37 636 aa12.39□□□□□ -0.43
LINC00654-201ENST00000379053 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
LINC00654-201ENST00000379053 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 PTPDC1A2A3K4 754 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 PUM3Q15397 648 aaKnown RBP12.38□□□□□ -0.43
LINC00654-201ENST00000379053 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
LINC00654-201ENST00000379053 SREK1Q8WXA9 508 aaKnown RBP12.38□□□□□ -0.43
LINC00654-201ENST00000379053 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00654-201ENST00000379053 DUOX2Q9NRD8 1548 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 HSP90AA4PQ58FG1 418 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ZKSCAN3Q9BRR0 538 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 TTC41PQ6P2S7 1318 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 CHMP2AO43633 222 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 NEMFO60524 1076 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ZBED4O75132 1171 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
LINC00654-201ENST00000379053 ARID5AQ03989 594 aa12.38□□□□□ -0.43
LINC00654-201ENST00000379053 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 NDC80O14777 642 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 CPXCR1Q8N123 301 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 DDX12PQ92771 950 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 RXRAP19793 462 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 CYLC1P35663 651 aaPredicted RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 UBE2HP62256 183 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 BIRC3Q13489 604 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 TRIM6Q9C030 488 aaPredicted RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 ATP10BO94823 1461 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 NUCB1Q02818 461 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 TMX3Q96JJ7 454 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
LINC00654-201ENST00000379053 ABCC1P33527 1531 aa12.37□□□□□ -0.43
LINC00654-201ENST00000379053 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
LINC00654-201ENST00000379053 PRPHP41219 470 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 SLC8A3P57103 927 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 TCP10Q12799 353 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms