RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 IQSEC3Q9UPP2 1182 aaPredicted RBP20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 COL1A1P02452 1464 aaPredicted RBP20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 A0A0G2JLW4 131 aa20.73■□□□□ 0.91
THUMPD2-201ENST00000378727 GPAA1O43292 621 aa20.73■□□□□ 0.91
THUMPD2-201ENST00000378727 CWC22Q9HCG8 908 aaKnown RBP20.73■□□□□ 0.91
THUMPD2-201ENST00000378727 KRT32Q14532 448 aa20.73■□□□□ 0.91
THUMPD2-201ENST00000378727 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
THUMPD2-201ENST00000378727 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 CAVIN4Q5BKX8 364 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 FBXO33Q7Z6M2 555 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 LAMA4Q16363 1823 aa20.72■□□□□ 0.91
THUMPD2-201ENST00000378727 NRXN2Q9P2S2 1712 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 RPGRQ92834 1020 aaKnown RBP20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 PNPLA7Q6ZV29 1317 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 ANKRD31Q8N7Z5 1873 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 MAP3K12Q12852 859 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 NLGN1Q8N2Q7 840 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 GNL3LQ9NVN8 582 aaKnown RBP20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
THUMPD2-201ENST00000378727 LARGE1O95461 756 aa20.7■□□□□ 0.9
THUMPD2-201ENST00000378727 MAGEB6Q8N7X4 407 aa20.7■□□□□ 0.9
THUMPD2-201ENST00000378727 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
THUMPD2-201ENST00000378727 TNPO1Q92973 898 aaKnown RBP20.7■□□□□ 0.9
THUMPD2-201ENST00000378727 TCEANC2Q96MN5 208 aa20.7■□□□□ 0.9
THUMPD2-201ENST00000378727 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
THUMPD2-201ENST00000378727 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
THUMPD2-201ENST00000378727 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
THUMPD2-201ENST00000378727 PKP1Q13835 747 aa20.69■□□□□ 0.9
THUMPD2-201ENST00000378727 VPS37DQ86XT2 251 aa20.69■□□□□ 0.9
THUMPD2-201ENST00000378727 FGAP02671 866 aa20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 TXNRD3Q86VQ6 643 aa20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 MYH13Q9UKX3 1938 aa20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 HOXA10P31260 410 aaPredicted RBP20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 CAMKK2Q96RR4 588 aa20.68■□□□□ 0.9
THUMPD2-201ENST00000378727 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
THUMPD2-201ENST00000378727 EZH2Q15910 746 aaKnown RBP20.67■□□□□ 0.9
THUMPD2-201ENST00000378727 LRP2BPQ9P2M1 347 aa20.67■□□□□ 0.9
THUMPD2-201ENST00000378727 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
THUMPD2-201ENST00000378727 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 ANKIB1Q9P2G1 1089 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 TPCN1Q9ULQ1 816 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 E7EWF7 191 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 SEMA3EO15041 775 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 ME3Q16798 604 aa20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 ZSCAN31Q96LW9 406 aaPredicted RBP20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 ANO8Q9HCE9 1232 aaPredicted RBP20.66■□□□□ 0.9
THUMPD2-201ENST00000378727 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 XDHP47989 1333 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 MCM4P33991 863 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 NUCB2P80303 420 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 LEMD3Q9Y2U8 911 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 ST3GAL1Q11201 340 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 AIDAQ96BJ3 306 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 SH2B1Q9NRF2 756 aaPredicted RBP20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 ABCF2Q9UG63 623 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 ZDHHC9Q9Y397 364 aa20.65■□□□□ 0.9
THUMPD2-201ENST00000378727 PDS5AQ29RF7 1337 aaKnown RBP20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 MMP10P09238 476 aa20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 HAND2P61296 217 aa20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 GPSM2P81274 684 aa20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 ANKRD1Q15327 319 aa20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 BRIP1Q9BX63 1249 aa20.64■□□□□ 0.89
THUMPD2-201ENST00000378727 MBD4O95243 580 aa20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 IMMTQ16891 758 aaKnown RBP20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 BBOX1O75936 387 aa20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 HMGB1P09429 215 aaKnown RBP20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 ADGRA1Q86SQ6 560 aa20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 ARMT1Q9H993 441 aa20.63■□□□□ 0.89
THUMPD2-201ENST00000378727 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 ZBTB22O15209 634 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 EXOSC10Q01780 885 aaKnown RBP20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 Q6ZUG5 572 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 DHX32Q7L7V1 743 aaKnown RBP20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 CCDC83Q8IWF9 413 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 ZNF384Q8TF68 577 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
THUMPD2-201ENST00000378727 CYP7A1P22680 504 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 CLEC17AQ6ZS10 378 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 C15orf52Q6ZUT6 534 aaKnown RBP20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 EPB41L4AQ9HCS5 686 aaPredicted RBP20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms