RNA–Protein interactions for RNA: ENST00000378535.4

KITLG-204, Transcript of KIT ligand, humanhuman

TSL 1 (best)

Gene KITLG, Length 5,191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KITLG-204ENST00000378535 PDE3AQ14432 1141 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 CFAP100Q494V2 611 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 SAMD7Q7Z3H4 446 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 C7orf43Q8WVR3 580 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 CELF1Q92879 486 aaKnown RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 NEUROD6Q96NK8 337 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 UBN2Q6ZU65 1347 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 ABCC12Q96J65 1359 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 COL3A1P02461 1466 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 CCER2I3L3R5 266 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 HSPA8P11142 646 aaKnown RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 MAP3K9P80192 1104 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 TAF1CQ15572 869 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 PPP4R3BQ5MIZ7 849 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 TMED8Q6PL24 325 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 PARK7Q99497 189 aaKnown RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 EFCC1Q9HA90 598 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 RAI14Q9P0K7 980 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 U3KPZ7 1027 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 COL1A1P02452 1464 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 TOGARAM1Q9Y4F4 1720 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 FOXN1O15353 648 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 ZSCAN25Q6NSZ9 544 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 SMCR8Q8TEV9 937 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 TSR2Q969E8 191 aaKnown RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 COA7Q96BR5 231 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 ZNF287Q9HBT7 754 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 MINPP1Q9UNW1 487 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 RTL9Q8NET4 1388 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 H7C1W4 665 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 FMNL1O95466 1100 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 CCNA1P78396 465 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 POLA2Q14181 598 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 TTLL11Q8NHH1 800 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 RAET1EQ8TD07 263 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 FRAT1Q92837 279 aaPredicted RBP3.21□□□□□ -1.9
KITLG-204ENST00000378535 TRIM47Q96LD4 638 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.21□□□□□ -1.9
KITLG-204ENST00000378535 SH2D4AQ9H788 454 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 CD209Q9NNX6 404 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 LRP2BPQ9P2M1 347 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 PRKAG2Q9UGJ0 569 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 SERPINA10Q9UK55 444 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 PASKQ96RG2 1323 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 SHANK3Q9BYB0 1731 aa3.21□□□□□ -1.9
KITLG-204ENST00000378535 ARFGEF1Q9Y6D6 1849 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 FANCIQ9NVI1 1328 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 GNAI2P04899 355 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SLC3A2P08195 630 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 SCNN1DP51172 638 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 FCGRTP55899 365 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ZNF280AP59817 542 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 CACNB1Q02641 598 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 ATP2B3Q16720 1220 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 PROSER3Q2NL68 480 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SAPCD2Q86UD0 394 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 TRMT44Q8IYL2 757 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 LPIN2Q92539 896 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 PHAXQ9H814 394 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 TAOK2Q9UL54 1235 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 TRIM35Q9UPQ4 493 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 COL5A3P25940 1745 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 SPDYE4A6NLX3 237 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ITGBL1O95965 494 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 ZKSCAN2Q63HK3 967 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 FBXO46Q6PJ61 603 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 C8orf58Q8NAV2 365 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 GREM2Q9H772 168 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SEC31BQ9NQW1 1179 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 KCNH4Q9UQ05 1017 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 UBE2Q2LH0YL09 131 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 TRAF5O00463 557 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SLC10A3P09131 477 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 TTF1Q15361 905 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 MPHOSPH6Q99547 160 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 MCOLN1Q9GZU1 580 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 GINM1Q9NU53 330 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ABCF2Q9UG63 623 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ISY1Q9ULR0 285 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 TRIM17Q9Y577 477 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 IVNS1ABPQ9Y6Y0 642 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 WDR90Q96KV7 1748 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 TJP1Q07157 1748 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SCN7AQ01118 1682 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SASH1O94885 1247 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ZNF853P0CG23 659 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 IRX3P78415 501 aaPredicted RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 HTRA3P83110 453 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SP3Q02447 781 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 CWF19L2Q2TBE0 894 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 FAM161AQ3B820 660 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 SLC9C1Q4G0N8 1177 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 CCDC174Q6PII3 467 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 C15orf52Q6ZUT6 534 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 FEZ1Q99689 392 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 ZCCHC17Q9NP64 241 aaKnown RBP3.2□□□□□ -1.9
KITLG-204ENST00000378535 POLLQ9UGP5 575 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 PGAP2Q9UHJ9 254 aa3.2□□□□□ -1.9
KITLG-204ENST00000378535 CCL15-CCL14A0A0B4J2E2 113 aa3.19□□□□□ -1.9
KITLG-204ENST00000378535 TCP10L2B9ZVM9 353 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms