RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 APPBP2Q92624 585 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 KDM6BO15054 1643 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 BRD1O95696 1058 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
RPGR-203ENST00000378505 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 ERVK-7P63135 1459 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPGR-203ENST00000378505 TMEM2Q9UHN6 1383 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
RPGR-203ENST00000378505 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 KRT222Q8N1A0 295 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 CCDC175P0C221 793 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 DESP17661 470 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 IL17REQ8NFR9 667 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 NEO1Q92859 1461 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 MBD4O95243 580 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 KRT2P35908 639 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 ST5P78524 1137 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 TRAF1Q13077 416 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 ERMNQ8TAM6 284 aa12.86□□□□□ -0.35
RPGR-203ENST00000378505 ZNF496Q96IT1 587 aaPredicted RBP12.86□□□□□ -0.35
RPGR-203ENST00000378505 TARBP1Q13395 1621 aaKnown RBP12.86□□□□□ -0.35
RPGR-203ENST00000378505 ELP1O95163 1332 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 RXRAP19793 462 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 NOP2P46087 812 aaKnown RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 NAPAP54920 295 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 ASIC1P78348 528 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 MYL5Q02045 173 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 HLTFQ14527 1009 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPGR-203ENST00000378505 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 RILPL1Q5EBL4 403 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 CTAGE15A4D2H0 777 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 CTAGE8P0CG41 777 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 CTAGE6Q86UF2 777 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 CTAGE4Q8IX94 777 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 IFFO1Q0D2I5 559 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 XAGE2Q96GT9 111 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 GTPBP4Q9BZE4 634 aaKnown RBP12.85□□□□□ -0.35
RPGR-203ENST00000378505 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 KDM5DQ9BY66 1539 aa12.85□□□□□ -0.35
RPGR-203ENST00000378505 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ATP5JP18859 108 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ZRSR2Q15696 482 aaKnown RBP12.84□□□□□ -0.35
RPGR-203ENST00000378505 A1BGP04217 495 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 PLCG2P16885 1265 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ITGA6P23229 1130 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 FEZ1Q99689 392 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 B4E1Z4 1266 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 GPAA1O43292 621 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 MYO1BO43795 1136 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
RPGR-203ENST00000378505 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ABCA8O94911 1581 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
RPGR-203ENST00000378505 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 ZNF804AQ7Z570 1209 aa12.84□□□□□ -0.35
RPGR-203ENST00000378505 IFI16Q16666 785 aaKnown RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
RPGR-203ENST00000378505 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 RRAGDQ9NQL2 400 aaPredicted RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 STX17P56962 302 aa12.83□□□□□ -0.36
RPGR-203ENST00000378505 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
RPGR-203ENST00000378505 ANKRD2Q9GZV1 360 aa12.83□□□□□ -0.36
RPGR-203ENST00000378505 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPGR-203ENST00000378505 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
RPGR-203ENST00000378505 ANKRD62A6NC57 917 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 GNA11P29992 359 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 SYCP3Q8IZU3 236 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 DYDC1Q8WWB3 177 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 GADD45BO75293 160 aaPredicted RBP12.82□□□□□ -0.36
RPGR-203ENST00000378505 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
RPGR-203ENST00000378505 TUBB4BP68371 445 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 KRT83P78385 493 aa12.82□□□□□ -0.36
RPGR-203ENST00000378505 DTHD1Q6ZMT9 781 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms