RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 ACEP12821 1306 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 C10orf67Q8IYJ2 551 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 PRKAG2Q9UGJ0 569 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 CETN1Q12798 172 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 ATRIPQ8WXE1 791 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 WDR7Q9Y4E6 1490 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 ZNF569Q5MCW4 686 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 HEATR3Q7Z4Q2 680 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 CCDC155Q8N6L0 562 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 USP26Q9BXU7 913 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 GINS2Q9Y248 185 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 SPTLC2O15270 562 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 SKIV2LQ15477 1246 aaKnown RBP13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 OTUD6BQ8N6M0 293 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
PCDHA9-201ENST00000378122 UIMC1Q96RL1 719 aa13.58□□□□□ -0.23
PCDHA9-201ENST00000378122 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.23
PCDHA9-201ENST00000378122 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 TNNI2P48788 182 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 STX17P56962 302 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 TSPYL6Q8N831 410 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 SELENOSQ9BQE4 189 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 TRIM37O94972 964 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 UBXN1Q04323 297 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 IDI1Q13907 227 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
PCDHA9-201ENST00000378122 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 CCDC121Q6ZUS5 278 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 GUCA1BQ9UMX6 200 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 CCDC129Q6ZRS4 1044 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 PHACTR2O75167 634 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 ARID5AQ03989 594 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 SBNO2Q9Y2G9 1366 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 KIF4AO95239 1232 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 IL2RBP14784 551 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 TPTE2Q6XPS3 522 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 KRT13P13646 458 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 DNAJC21Q5F1R6 531 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 FNBP4Q8N3X1 1017 aaPredicted RBP13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 TBCAO75347 108 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 TACC1O75410 805 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 UQCRFS1P1P0C7P4 283 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 CYP7A1P22680 504 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 C6orf163Q5TEZ5 329 aa13.57□□□□□ -0.24
PCDHA9-201ENST00000378122 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 DENND4BO75064 1496 aaPredicted RBP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 TUBB4AP04350 444 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 TEX13AQ9BXU3 409 aaPredicted RBP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 LDHCP07864 332 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 CEP57Q86XR8 500 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 U2AF2P26368 475 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 UTP14AQ9BVJ6 771 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 CPA1P15085 419 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 GRM8O00222 908 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 ASIC1P78348 528 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 RASAL2Q9UJF2 1139 aa13.56□□□□□ -0.24
PCDHA9-201ENST00000378122 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 RXRAP19793 462 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 CHMLP26374 656 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 KRT2P35908 639 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 DCTPP1Q9H773 170 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 STX8Q9UNK0 236 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 SORBS3O60504 671 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms