RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 USP37Q86T82 979 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 MAPK8IP1Q9UQF2 711 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 PPME1Q9Y570 386 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 CCNT1O60563 726 aaKnown RBP18.43■□□□□ 0.54
RGP1-201ENST00000378078 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
RGP1-201ENST00000378078 HSPA1LP34931 641 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 DNAI1Q9UI46 699 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 FAM47CQ5HY64 1035 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 MNAT1P51948 309 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
RGP1-201ENST00000378078 ZNF174Q15697 407 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 FNBP1Q96RU3 617 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 KANK3Q6NY19 840 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 DTNBO60941 627 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 NEK11Q8NG66 645 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.42■□□□□ 0.54
RGP1-201ENST00000378078 GMNNO75496 209 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 HSPA4P34932 840 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
RGP1-201ENST00000378078 PLVAPQ9BX97 442 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 TRIM7Q9C029 511 aa18.42■□□□□ 0.54
RGP1-201ENST00000378078 SPDYE16A6NNV3 312 aaPredicted RBP18.41■□□□□ 0.54
RGP1-201ENST00000378078 KCNA4P22459 653 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 TTC30BQ8N4P2 665 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 LRRC43Q8N309 656 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 CPXCR1Q8N123 301 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
RGP1-201ENST00000378078 LDHBP07195 334 aaKnown RBP18.41■□□□□ 0.54
RGP1-201ENST00000378078 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
RGP1-201ENST00000378078 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 TSTA3Q13630 321 aaPredicted RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 LEO1Q8WVC0 666 aaPredicted RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 LPXNO60711 386 aa18.4■□□□□ 0.54
RGP1-201ENST00000378078 NOL3O60936 208 aaKnown RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 CEP57Q86XR8 500 aa18.4■□□□□ 0.54
RGP1-201ENST00000378078 NSRP1Q9H0G5 558 aaKnown RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 TRIM27P14373 513 aa18.4■□□□□ 0.54
RGP1-201ENST00000378078 BSPRYQ5W0U4 402 aa18.4■□□□□ 0.54
RGP1-201ENST00000378078 FMNL3Q8IVF7 1028 aa18.4■□□□□ 0.54
RGP1-201ENST00000378078 DDX19AQ9NUU7 478 aaKnown RBP18.4■□□□□ 0.54
RGP1-201ENST00000378078 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.54
RGP1-201ENST00000378078 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.54
RGP1-201ENST00000378078 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.54
RGP1-201ENST00000378078 GSDMDP57764 484 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
RGP1-201ENST00000378078 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
RGP1-201ENST00000378078 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 CASC4Q6P4E1 433 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
RGP1-201ENST00000378078 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
RGP1-201ENST00000378078 LONRF3Q496Y0 759 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 CCDC14Q49A88 953 aa18.39■□□□□ 0.53
RGP1-201ENST00000378078 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 VPS52Q8N1B4 723 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 MAN1A1P33908 653 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 FOXD4Q12950 439 aaPredicted RBP18.38■□□□□ 0.53
RGP1-201ENST00000378078 WDR44Q5JSH3 913 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 KRT79Q5XKE5 535 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 RBM17Q96I25 401 aaKnown RBP18.38■□□□□ 0.53
RGP1-201ENST00000378078 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 UFL1O94874 794 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 TRPC3Q13507 836 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 SYT1P21579 422 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 ZNF569Q5MCW4 686 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 ATP2A1O14983 1001 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 NCAPH2Q6IBW4 605 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 METTL13Q8N6R0 699 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
RGP1-201ENST00000378078 MED10Q9BTT4 135 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 ACEP12821 1306 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 PLEKHH2Q8IVE3 1493 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 CTAGE9A4FU28 777 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 MICALL1Q8N3F8 863 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 PARP1P09874 1014 aaKnown RBP18.37■□□□□ 0.53
RGP1-201ENST00000378078 TFCP2Q12800 502 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 VPS18Q9P253 973 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
RGP1-201ENST00000378078 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
RGP1-201ENST00000378078 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 POTEB2H3BUK9 544 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 KIF5AQ12840 1032 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 SESTD1Q86VW0 696 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms