RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 GNL3LQ9NVN8 582 aaKnown RBP9.52□□□□□ -0.88
CKAP2-203ENST00000378037 ADAMTS7Q9UKP4 1686 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 ERCC3P19447 782 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
CKAP2-203ENST00000378037 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 PLIN2Q99541 437 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 MKNK2Q9HBH9 465 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 ATP6V1DQ9Y5K8 247 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 SCNN1DP51172 638 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 KRT85P78386 507 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 KLHL10Q6JEL2 608 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
CKAP2-203ENST00000378037 CELF1Q92879 486 aaKnown RBP9.52□□□□□ -0.89
CKAP2-203ENST00000378037 TEX13AQ9BXU3 409 aaPredicted RBP9.52□□□□□ -0.89
CKAP2-203ENST00000378037 TRIM34Q9BYJ4 488 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 GLI3P10071 1580 aa9.52□□□□□ -0.89
CKAP2-203ENST00000378037 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 DIXDC1Q155Q3 683 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 CCDC73Q6ZRK6 1079 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 NOC3LQ8WTT2 800 aaKnown RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 CDC5LQ99459 802 aaKnown RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 NACAP1Q9BZK3 213 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 RAD50Q92878 1312 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 SMIM22K7EJ46 135 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 M0R2C6 588 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 C17orf53Q8N3J3 647 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 C8orf76Q96K31 380 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 SLC4A9Q96Q91 983 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TSPY2A6NKD2 308 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 GOLGA6L19H0YKK7 550 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 HOXB7P09629 217 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TNS3Q68CZ2 1445 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 MAP3K15Q6ZN16 1313 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-203ENST00000378037 KBTBD3Q8NAB2 608 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TTLL11Q8NHH1 800 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TRIM5Q9C035 493 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
CKAP2-203ENST00000378037 GOLGA8AA7E2F4 631 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 UFL1O94874 794 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 FGAP02671 866 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 CHRNDQ07001 517 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 SASS6Q6UVJ0 657 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 EEF2KMTQ96G04 330 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 TMX1Q9H3N1 280 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 PDE8AO60658 829 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
CKAP2-203ENST00000378037 CACNB3P54284 484 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 ZSCAN23Q3MJ62 389 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
CKAP2-203ENST00000378037 LSG1Q9H089 658 aaKnown RBP9.5□□□□□ -0.89
CKAP2-203ENST00000378037 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 RGPD1P0DJD0 1748 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 PTPDC1A2A3K4 754 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 KLRK1P26718 216 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 HSPA4P34932 840 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 MAPKAPK5Q8IW41 473 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 STAMQ92783 540 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 DACT1Q9NYF0 836 aa9.5□□□□□ -0.89
CKAP2-203ENST00000378037 CYP19A1P11511 503 aaPredicted RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 MCAMP43121 646 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 SF3B2Q13435 895 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 SART3Q15020 963 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 ZYXQ15942 572 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 MFSD6Q6ZSS7 791 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 KCNJ14Q9UNX9 436 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 AFF2P51816 1311 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 TTC41PQ6P2S7 1318 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 UBE2Q2LH0YL09 131 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 MCM2P49736 904 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 METAP2P50579 478 aaKnown RBP eCLIP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 PRKG1Q13976 671 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 TNS1Q9HBL0 1735 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 AK9Q5TCS8 1911 aa9.49□□□□□ -0.89
CKAP2-203ENST00000378037 KINO60870 393 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 ZSCAN22P10073 491 aaPredicted RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 CWC22Q9HCG8 908 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 PIH1D3Q9NQM4 214 aaKnown RBP9.49□□□□□ -0.89
CKAP2-203ENST00000378037 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 MRE11P49959 708 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 POLA2Q14181 598 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 SPATA5Q8NB90 893 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 ZHX3Q9H4I2 956 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 TMEM63CQ9P1W3 806 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms