RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SLC27A2	O14975	620 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	RASGRF1	Q13972	1273 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	ADCK5	Q3MIX3	580 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	SLC10A5	Q5PT55	438 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	UTP14C	Q5TAP6	766 aa	Known RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	VPS53	Q5VIR6	699 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	FBXO41	Q8TF61	875 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	AIDA	Q96BJ3	306 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	TRERF1	Q96PN7	1200 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	HELLS	Q9NRZ9	838 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499		U3KPZ7	1027 aa	Predicted RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	NHS	Q6T4R5	1651 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	CYP2E1	P05181	493 aa	Predicted RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	ZFY	P08048	801 aa	Predicted RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	MCM2	P49736	904 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	MAGEB6	Q8N7X4	407 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	MAP4K1	Q92918	833 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	GRPEL1	Q9HAV7	217 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	PARP3	Q9Y6F1	533 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	SPDYE4	A6NLX3	237 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	COL23A1	Q86Y22	540 aa	Predicted RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	STK11IP	Q8N1F8	1099 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	TMX3	Q96JJ7	454 aa		13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	PIH1D3	Q9NQM4	214 aa	Known RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.84	□□□□□ -0.19
LMO7-204	ENST00000377499	MRE11	P49959	708 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	EZH2	Q15910	746 aa	Known RBP	13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	NLGN1	Q8N2Q7	840 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	OSBP2	Q969R2	916 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	ANKRD2	Q9GZV1	360 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	PLSCR1	O15162	318 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	ZMYM1	Q5SVZ6	1142 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	TOMM22	Q9NS69	142 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	C6orf229	H3BNL8	230 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499		M0R2C6	588 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	MMP10	P09238	476 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	FBXW7	Q969H0	707 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	TAOK2	Q9UL54	1235 aa		13.83	□□□□□ -0.2
LMO7-204	ENST00000377499	MAST3	O60307	1309 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	ZNF532	Q9HCE3	1301 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499		G3V3G9	751 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	DTNB	O60941	627 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	DCAF8	Q5TAQ9	597 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	APPBP2	Q92624	585 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	RBM17	Q96I25	401 aa	Known RBP	13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	STK32B	Q9NY57	414 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	AK2	P54819	239 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	STK3	Q13188	491 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	ZGPAT	Q8N5A5	531 aa	Known RBP	13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	MIGA1	Q8NAN2	632 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	PUS7L	Q9H0K6	701 aa	Known RBP	13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	WWC3	Q9ULE0	1092 aa		13.82	□□□□□ -0.2
LMO7-204	ENST00000377499	GPAA1	O43292	621 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	FGFR2	P21802	821 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	UBE4A	Q14139	1066 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	NECTIN1	Q15223	517 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	TMED8	Q6PL24	325 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	TSC1	Q92574	1164 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	GPR101	Q96P66	508 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	LRRC2	Q9BYS8	371 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	RGS17	Q9UGC6	210 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	ANKRD36C	Q5JPF3	1778 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	HIBADH	P31937	336 aa	Known RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	TTLL5	Q6EMB2	1281 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	RNF216	Q9NWF9	866 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	HSPD1	P10809	573 aa	Known RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	GRAP	Q13588	217 aa		13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	GRAPL	Q8TC17	118 aa	Predicted RBP	13.81	□□□□□ -0.2
LMO7-204	ENST00000377499	ZNF804B	A4D1E1	1349 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	EPB41L2	O43491	1005 aa	Known RBP	13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	KIF20A	O95235	890 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	PDE6A	P16499	860 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	DDR1	Q08345	913 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	DEFB132	Q7Z7B7	95 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	FLAD1	Q8NFF5	587 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	NEK1	Q96PY6	1258 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	RGL2	O15211	777 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	CYP7A1	P22680	504 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	KRT32	Q14532	448 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	C4B	P0C0L5	1744 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	KLRK1	P26718	216 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	FAM193A	P78312	1265 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	IMMT	Q16891	758 aa	Known RBP	13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	TPRN	Q4KMQ1	711 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	CTNNA3	Q9UI47	895 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	TAF6L	Q9Y6J9	622 aa		13.8	□□□□□ -0.2
LMO7-204	ENST00000377499	UFL1	O94874	794 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	BAG6	P46379	1132 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	RUFY3	Q7L099	469 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	CHST3	Q7LGC8	479 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	LIMCH1	Q9UPQ0	1083 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	ARID4A	P29374	1257 aa	Predicted RBP	13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	RALYL	Q86SE5	291 aa	Known RBP	13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	CCDC83	Q8IWF9	413 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	BRWD3	Q6RI45	1802 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms