RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 C8orf76Q96K31 380 aa21.17■□□□□ 0.98
SF1-203ENST00000377387 AGXT2Q9BYV1 514 aa21.17■□□□□ 0.98
SF1-203ENST00000377387 USP27XA6NNY8 438 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 CPLX1O14810 134 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 NDUFA8P51970 172 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 IMMTQ16891 758 aaKnown RBP21.16■□□□□ 0.98
SF1-203ENST00000377387 PDCL2Q8N4E4 241 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 ENGASEQ8NFI3 743 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 ORC3Q9UBD5 711 aaPredicted RBP21.16■□□□□ 0.98
SF1-203ENST00000377387 LAMA4Q16363 1823 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 GPTP24298 496 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
SF1-203ENST00000377387 GPR108Q9NPR9 543 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 TNS3Q68CZ2 1445 aa21.16■□□□□ 0.98
SF1-203ENST00000377387 FOXP2O15409 715 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 LRRC8AQ8IWT6 810 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 DHX40Q8IX18 779 aaKnown RBP21.15■□□□□ 0.98
SF1-203ENST00000377387 SALL1Q9NSC2 1324 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 CTAGE5O15320 804 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 ATP2B3Q16720 1220 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 ANO10Q9NW15 660 aa21.15■□□□□ 0.98
SF1-203ENST00000377387 MRPS27Q92552 414 aaKnown RBP21.15■□□□□ 0.98
SF1-203ENST00000377387 ZRSR1Q15695 479 aaKnown RBP21.14■□□□□ 0.97
SF1-203ENST00000377387 RALYLQ86SE5 291 aaKnown RBP21.14■□□□□ 0.97
SF1-203ENST00000377387 AIFM3Q96NN9 605 aa21.14■□□□□ 0.97
SF1-203ENST00000377387 APPP05067 770 aa21.14■□□□□ 0.97
SF1-203ENST00000377387 SKILP12757 684 aa21.14■□□□□ 0.97
SF1-203ENST00000377387 U2AF2P26368 475 aaKnown RBP eCLIP21.14■□□□□ 0.973e-8■■■■■ 38.7
SF1-203ENST00000377387 CEP57L1Q8IYX8 460 aa21.13■□□□□ 0.97
SF1-203ENST00000377387 MARCKSP29966 332 aaPredicted RBP21.13■□□□□ 0.97
SF1-203ENST00000377387 ZNF213O14771 459 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 CTNNA3Q9UI47 895 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 CCDC69A6NI79 296 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 GPAA1O43292 621 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 DPCR1Q3MIW9 517 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 FMR1NBQ8N0W7 255 aaPredicted RBP21.12■□□□□ 0.97
SF1-203ENST00000377387 NKX2-3Q8TAU0 364 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
SF1-203ENST00000377387 CAVIN2O95810 425 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 IFIT5Q13325 482 aaKnown RBP21.11■□□□□ 0.97
SF1-203ENST00000377387 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 LINC00301Q8NCQ3 95 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
SF1-203ENST00000377387 KIF1AQ12756 1690 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 KIF28PB7ZC32 967 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 ANTXR2P58335 489 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 METTL24Q5JXM2 366 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 HPS5Q9UPZ3 1129 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 COL18A1P39060 1754 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 CIAO1O76071 339 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
SF1-203ENST00000377387 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
SF1-203ENST00000377387 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
SF1-203ENST00000377387 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 CCDC112Q8NEF3 446 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 NCOA7Q8NI08 942 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 RTEL1Q9NZ71 1219 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 ZNF335Q9H4Z2 1342 aaPredicted RBP21.1■□□□□ 0.97
SF1-203ENST00000377387 SPTLC2O15270 562 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 IDH1O75874 414 aaKnown RBP21.1■□□□□ 0.97
SF1-203ENST00000377387 SMC2O95347 1197 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 CEP135Q66GS9 1140 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 DNAJC10Q8IXB1 793 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 AKAP2Q9Y2D5 859 aa21.1■□□□□ 0.97
SF1-203ENST00000377387 EVA1CP58658 441 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 LDHAL6AQ6ZMR3 332 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 FBXO18Q8NFZ0 1043 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 MRFAP1L1Q96HT8 127 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 MYSM1Q5VVJ2 828 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 SARM1Q6SZW1 724 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 APPBP2Q92624 585 aa21.09■□□□□ 0.97
SF1-203ENST00000377387 A0A0G2JS52 829 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 SLC9C2Q5TAH2 1124 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 MB21D2Q8IYB1 491 aaPredicted RBP21.08■□□□□ 0.97
SF1-203ENST00000377387 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 SMTNL1A8MU46 457 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 NCBP1Q09161 790 aaKnown RBP21.08■□□□□ 0.97
SF1-203ENST00000377387 STK11IPQ8N1F8 1099 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 PHKBQ93100 1093 aa21.08■□□□□ 0.97
SF1-203ENST00000377387 WDR17Q8IZU2 1322 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 CDC25BP30305 580 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 MCAMP43121 646 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 LRRFIP1Q32MZ4 808 aaKnown RBP21.08■□□□□ 0.96
SF1-203ENST00000377387 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 NAT10Q9H0A0 1025 aaKnown RBP21.08■□□□□ 0.96
SF1-203ENST00000377387 SENP2Q9HC62 589 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 CNNM1Q9NRU3 951 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.96
SF1-203ENST00000377387 CTIFO43310 598 aaKnown RBP21.07■□□□□ 0.96
SF1-203ENST00000377387 ATL3Q6DD88 541 aa21.07■□□□□ 0.96
SF1-203ENST00000377387 HELBQ8NG08 1087 aaPredicted RBP21.07■□□□□ 0.96
SF1-203ENST00000377387 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
SF1-203ENST00000377387 DHX16O60231 1041 aaKnown RBP21.07■□□□□ 0.96
SF1-203ENST00000377387 ZNF202O95125 648 aa21.07■□□□□ 0.96
SF1-203ENST00000377387 IL2RBP14784 551 aa21.07■□□□□ 0.96
SF1-203ENST00000377387 PTPN14Q15678 1187 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms