RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 EXOSC10Q01780 885 aaKnown RBP20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 C3orf67Q6ZVT6 689 aa20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 AGXT2Q9BYV1 514 aa20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 SMIM5Q71RC9 77 aa20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 TAF1P21675 1872 aa20.74■□□□□ 0.91
NKX2-2-201ENST00000377142 SNAP23O00161 211 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 FGAP02671 866 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 MAP3K12Q12852 859 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 TTLL5Q6EMB2 1281 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 ARHGEF1Q92888 912 aaKnown RBP20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 BRF1Q92994 677 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 CHAMP1Q96JM3 812 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 MTMR6Q9Y217 621 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 A0A0G2JLW4 131 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 TCRBV5S4A2TA0A5A2 114 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
NKX2-2-201ENST00000377142 STK3Q13188 491 aa20.72■□□□□ 0.91
NKX2-2-201ENST00000377142 TPTE2Q6XPS3 522 aa20.72■□□□□ 0.91
NKX2-2-201ENST00000377142 FBXL16Q8N461 479 aa20.72■□□□□ 0.91
NKX2-2-201ENST00000377142 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
NKX2-2-201ENST00000377142 TCHHQ07283 1943 aa20.72■□□□□ 0.91
NKX2-2-201ENST00000377142 TMEM87AQ8NBN3 555 aa20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 GPT2Q8TD30 523 aa20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 BCAMP50895 628 aa20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 LARP1BQ659C4 914 aaKnown RBP20.71■□□□□ 0.91
NKX2-2-201ENST00000377142 UBR3Q6ZT12 1888 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 PFKFB2O60825 505 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 ADRA2BP18089 450 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 RFC4P35249 363 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 MRE11P49959 708 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
NKX2-2-201ENST00000377142 VPS37CA5D8V6 355 aaPredicted RBP20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 ZNF213O14771 459 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 LLPHQ9BRT6 129 aaKnown RBP20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 GNL3LQ9NVN8 582 aaKnown RBP20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 CARMIL3Q8ND23 1372 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 HAND2P61296 217 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 CHMP4CQ96CF2 233 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 MINPP1Q9UNW1 487 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 TNRC6CQ9HCJ0 1690 aaKnown RBP20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
NKX2-2-201ENST00000377142 FAM196AQ6ZSG2 479 aa20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 MAGEB6Q8N7X4 407 aa20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 WDR19Q8NEZ3 1342 aa20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 NCOA7Q8NI08 942 aa20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 ZNF445P59923 1031 aa20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 FOXD4L6Q3SYB3 417 aaPredicted RBP20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 FOXD4L3Q6VB84 417 aaPredicted RBP20.68■□□□□ 0.9
NKX2-2-201ENST00000377142 MCM5P33992 734 aa20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 SCRN1Q12765 414 aa20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 CSPP1Q1MSJ5 1256 aa20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 RALYLQ86SE5 291 aaKnown RBP20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 MB21D2Q8IYB1 491 aaPredicted RBP20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 ZNF274Q96GC6 653 aaPredicted RBP20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 STRBPQ96SI9 672 aaKnown RBP20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 MYH13Q9UKX3 1938 aa20.67■□□□□ 0.9
NKX2-2-201ENST00000377142 PHF14O94880 888 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 ALX1Q15699 326 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 ZSCAN23Q3MJ62 389 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 CAVIN4Q5BKX8 364 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 CHD4Q14839 1912 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 USP48Q86UV5 1035 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 SMARCC2Q8TAQ2 1214 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 CNPY2Q9Y2B0 182 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 TIAM2Q8IVF5 1701 aa20.66■□□□□ 0.9
NKX2-2-201ENST00000377142 APPP05067 770 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 XRCC6P12956 609 aaKnown RBP eCLIP20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 EVCP57679 992 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 ANKRD2Q9GZV1 360 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 DTNBO60941 627 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 MBD4O95243 580 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 HMGN5P82970 282 aaKnown RBP20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 TRDNQ13061 729 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 CDC37L1Q7L3B6 337 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 GDPD2Q9HCC8 539 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 KIF3AQ9Y496 699 aa20.65■□□□□ 0.9
NKX2-2-201ENST00000377142 PNPLA7Q6ZV29 1317 aa20.64■□□□□ 0.89
NKX2-2-201ENST00000377142 NPHP1O15259 732 aa20.64■□□□□ 0.89
NKX2-2-201ENST00000377142 PRC1O43663 620 aa20.64■□□□□ 0.89
NKX2-2-201ENST00000377142 JAK2O60674 1132 aa20.64■□□□□ 0.89
NKX2-2-201ENST00000377142 GNAT2P19087 354 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms