RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 KCNQ2O43526 872 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 CEP57L1Q8IYX8 460 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 PTGS1P23219 599 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 SCARF1Q14162 830 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
HDAC6-203ENST00000376619 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
HDAC6-203ENST00000376619 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
HDAC6-203ENST00000376619 NAT10Q9H0A0 1025 aaKnown RBP12.94□□□□□ -0.34
HDAC6-203ENST00000376619 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
HDAC6-203ENST00000376619 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
HDAC6-203ENST00000376619 PRKAB2O43741 272 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 NR1I2O75469 434 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 XBP1P17861 261 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 AOPEPQ8N6M6 819 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 ATP10DQ9P241 1426 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
HDAC6-203ENST00000376619 PICALMQ13492 652 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
HDAC6-203ENST00000376619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC6-203ENST00000376619 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 EIF6P56537 245 aaKnown RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 WTAPQ15007 396 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 CNNM3Q8NE01 707 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 ERCC3P19447 782 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 SSRP1Q08945 709 aaKnown RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■□□□□ 10.1
HDAC6-203ENST00000376619 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 CDC5LQ99459 802 aaKnown RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 PPLO60437 1756 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 STX17P56962 302 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 SCRN1Q12765 414 aa12.92□□□□□ -0.34
HDAC6-203ENST00000376619 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
HDAC6-203ENST00000376619 M0R2C6 588 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 USP28Q96RU2 1077 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■■■ 44.3
HDAC6-203ENST00000376619 LAMC1P11047 1609 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 AK7Q96M32 723 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 WDR17Q8IZU2 1322 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-203ENST00000376619 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 TMC6Q7Z403 805 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
HDAC6-203ENST00000376619 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 CLCN1P35523 988 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 FAM170AA1A519 330 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 CDKL5O76039 1030 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 NLRP5P59047 1200 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 HAUS7Q99871 368 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 PDIA6Q15084 440 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
HDAC6-203ENST00000376619 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.35
HDAC6-203ENST00000376619 LRMPQ12912 555 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 ENOX2Q16206 610 aaKnown RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 APPBP2Q92624 585 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 MAST3O60307 1309 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 IGSF3O75054 1194 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 SPTLC2O15270 562 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 PDE8AO60658 829 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 COBLO75128 1261 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 SYKP43405 635 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms