RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 CMTR1Q8N1G2 835 aaKnown RBP15.97■□□□□ 0.15
DDR1-225ENST00000376568 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
DDR1-225ENST00000376568 RASGRF1Q13972 1273 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 ZNF589Q86UQ0 364 aaPredicted RBP15.96■□□□□ 0.15
DDR1-225ENST00000376568 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 KAZALD1Q96I82 304 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 TFIP11Q9UBB9 837 aaKnown RBP15.96■□□□□ 0.15
DDR1-225ENST00000376568 FAM196BA6NMK8 535 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
DDR1-225ENST00000376568 NCOA5Q9HCD5 579 aaKnown RBP15.96■□□□□ 0.15
DDR1-225ENST00000376568 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
DDR1-225ENST00000376568 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
DDR1-225ENST00000376568 KLF18A0A0U1RQI7 1052 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 CLEC4GQ6UXB4 293 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 KIF3AQ9Y496 699 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 IBTKQ9P2D0 1353 aaPredicted RBP15.95■□□□□ 0.14
DDR1-225ENST00000376568 USP17L12C9JPN9 530 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 USP17L21D6R901 530 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
DDR1-225ENST00000376568 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 SPTY2D1Q68D10 685 aaPredicted RBP15.95■□□□□ 0.14
DDR1-225ENST00000376568 IQCA1Q86XH1 822 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 TTLL6Q8N841 843 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
DDR1-225ENST00000376568 Q6ZUG5 572 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 CHMP5Q9NZZ3 219 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 HMG20BQ9P0W2 317 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 PDE6AP16499 860 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 ZGPATQ8N5A5 531 aaKnown RBP15.94■□□□□ 0.14
DDR1-225ENST00000376568 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 MYO1BO43795 1136 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 TSPY3P0CV98 308 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 TSPY8P0CW00 308 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 IBSPP21815 317 aaPredicted RBP15.94■□□□□ 0.14
DDR1-225ENST00000376568 MCAMP43121 646 aa15.94■□□□□ 0.14
DDR1-225ENST00000376568 MYOM1P52179 1685 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 NCAPD2Q15021 1401 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 SAFBQ15424 915 aaKnown RBP eCLIP15.93■□□□□ 0.14
DDR1-225ENST00000376568 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 PANK2Q9BZ23 570 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
DDR1-225ENST00000376568 GRAPQ13588 217 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 TXNRD3Q86VQ6 643 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
DDR1-225ENST00000376568 CHAMP1Q96JM3 812 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
DDR1-225ENST00000376568 USP40Q9NVE5 1235 aa15.93■□□□□ 0.14
DDR1-225ENST00000376568 IFT172Q9UG01 1749 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 CCDC171Q6TFL3 1326 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 ATP5JP18859 108 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 GPSM2P81274 684 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 GOLGA8AA7E2F4 631 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 PRC1O43663 620 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 DPEP1P16444 411 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 SSFA2P28290 1259 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 RNF214Q8ND24 703 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 HDAC9Q9UKV0 1011 aa15.92■□□□□ 0.14
DDR1-225ENST00000376568 USP42Q9H9J4 1324 aaKnown RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 MKRN3Q13064 507 aaKnown RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 MIGA2Q7L4E1 593 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 PES1O00541 588 aaKnown RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 NTSR2O95665 410 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
DDR1-225ENST00000376568 SLC26A6Q9BXS9 759 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 BCL9O00512 1426 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 OSBP2Q969R2 916 aa15.91■□□□□ 0.14
DDR1-225ENST00000376568 FAM173BQ6P4H8 233 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 NCOA7Q8NI08 942 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 APPBP2Q92624 585 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 XDHP47989 1333 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 SGSM2O43147 1006 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 AK2P54819 239 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 DHX8Q14562 1220 aaKnown RBP15.9■□□□□ 0.14
DDR1-225ENST00000376568 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 TCEAL9Q9UHQ7 104 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 DLGAP5Q15398 846 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
DDR1-225ENST00000376568 PDE4BQ07343 736 aa15.89■□□□□ 0.13
DDR1-225ENST00000376568 POLA2Q14181 598 aa15.89■□□□□ 0.13
DDR1-225ENST00000376568 KRT32Q14532 448 aa15.89■□□□□ 0.13
DDR1-225ENST00000376568 TBC1D10BQ4KMP7 808 aaPredicted RBP15.89■□□□□ 0.13
DDR1-225ENST00000376568 ATG9AQ7Z3C6 839 aa15.89■□□□□ 0.13
DDR1-225ENST00000376568 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
DDR1-225ENST00000376568 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms