RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 BCAP29Q9UHQ4 241 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 AFAP1Q8N556 730 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 CSRNP2Q9H175 543 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 VPS18Q9P253 973 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 PHLDB2Q86SQ0 1253 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 TMEM87AQ8NBN3 555 aa9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
SHROOM4-202ENST00000376020 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 PAK2Q13177 524 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 GPATCH11Q8N954 259 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 RNF14Q9UBS8 474 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 EDC4Q6P2E9 1401 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 APOBRQ0VD83 1088 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 VCX3BQ9H321 246 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 TRIM75PA6NK02 468 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 FYB1O15117 783 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 UQCRFS1P1P0C7P4 283 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 SEMA3FQ13275 785 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 CCDC174Q6PII3 467 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 GBP7Q8N8V2 638 aaPredicted RBP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 NOS1P29475 1434 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 FKBP4Q02790 459 aaKnown RBP eCLIP9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 PPP1R42Q7Z4L9 355 aa9.96□□□□□ -0.81
SHROOM4-202ENST00000376020 NAP1L4Q99733 375 aaKnown RBP9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 CEP152O94986 1710 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 PTGS1P23219 599 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 CHMLP26374 656 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 ACTN2P35609 894 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 MAP3K21Q5TCX8 1036 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 ETF1P62495 437 aaKnown RBP9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 DNM1Q05193 864 aaKnown RBP9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 TDRD12Q587J7 1177 aaKnown RBP9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 PARP2Q9UGN5 583 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 UHRF1BP1LA0JNW5 1464 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 A2MP01023 1474 aa9.96□□□□□ -0.82
SHROOM4-202ENST00000376020 IFIT5Q13325 482 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 RBBP5Q15291 538 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 MAGEF1Q9HAY2 307 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ATP10AO60312 1499 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 IGHMBP2P38935 993 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 EVA1CP58658 441 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 KRBA2Q6ZNG9 492 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 MRPL50Q8N5N7 158 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ATRIPQ8WXE1 791 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 USP5P45974 858 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 CCDC6Q16204 474 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 MFSD6Q6ZSS7 791 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ATP2B1P20020 1258 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 SEPT2Q15019 361 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 DAAM2Q86T65 1068 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 AOPEPQ8N6M6 819 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ESR2Q92731 530 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 IQCGQ9H095 443 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 MTUS1Q9ULD2 1270 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 TRIM58Q8NG06 486 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 FERMT2Q96AC1 680 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 KLHL10Q6JEL2 608 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 CEP85Q6P2H3 762 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 SYCE1Q8N0S2 351 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 IL1RAPL2Q9NP60 686 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 ZBTB43O43298 467 aa9.95□□□□□ -0.82
SHROOM4-202ENST00000376020 NPATQ14207 1427 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 IL15P40933 162 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 SPTY2D1Q68D10 685 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 NUDT16Q96DE0 195 aaKnown RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 DNAJC25Q9H1X3 360 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 FOSBP53539 338 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 ANTXR1Q9H6X2 564 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 WASLO00401 505 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 TRIM37O94972 964 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 RNF168Q8IYW5 571 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 BRF1Q92994 677 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 STX10O60499 249 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 ZGPATQ8N5A5 531 aaKnown RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 NECTIN2Q92692 538 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 SPAG5Q96R06 1193 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 USP16Q9Y5T5 823 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 CCDC40Q4G0X9 1142 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 LINS1Q8NG48 757 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 IPO4Q8TEX9 1081 aaKnown RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 A0A1W2PQ27 194 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 A0A1W2PQ64 194 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 A0A1W2PQD8 194 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 ATF3P18847 181 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 CFAP221Q4G0U5 840 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 CEP63Q96MT8 703 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 MBD5Q9P267 1494 aa9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-202ENST00000376020 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms