RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 IFNL1Q8IU54 200 aa17.98■□□□□ 0.47
PTCH1-202ENST00000375271 DNAAF4Q8WXU2 420 aa17.98■□□□□ 0.47
PTCH1-202ENST00000375271 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
PTCH1-202ENST00000375271 CFAP100Q494V2 611 aa17.97■□□□□ 0.47
PTCH1-202ENST00000375271 WNK4Q96J92 1243 aa17.97■□□□□ 0.47
PTCH1-202ENST00000375271 ZNF646O15015 1829 aaPredicted RBP17.96■□□□□ 0.47
PTCH1-202ENST00000375271 CLRN2A0PK11 232 aa17.96■□□□□ 0.47
PTCH1-202ENST00000375271 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
PTCH1-202ENST00000375271 LINS1Q8NG48 757 aa17.96■□□□□ 0.47
PTCH1-202ENST00000375271 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
PTCH1-202ENST00000375271 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
PTCH1-202ENST00000375271 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
PTCH1-202ENST00000375271 TAF5LO75529 589 aa17.95■□□□□ 0.46
PTCH1-202ENST00000375271 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
PTCH1-202ENST00000375271 G2E3Q7L622 706 aa17.95■□□□□ 0.46
PTCH1-202ENST00000375271 PLIN1O60240 522 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-202ENST00000375271 MAP3K11Q16584 847 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 ANKRD13AQ8IZ07 590 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 MTMR14Q8NCE2 650 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 HELBQ8NG08 1087 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-202ENST00000375271 ZBED3Q96IU2 234 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-202ENST00000375271 CNNM1Q9NRU3 951 aa17.94■□□□□ 0.46
PTCH1-202ENST00000375271 SPDYE2BA6NHP3 402 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 CSF1RP07333 972 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 SPDYE6P0CI01 402 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 EFCC1Q9HA90 598 aa17.93■□□□□ 0.46
PTCH1-202ENST00000375271 FKBP1AP62942 108 aaKnown RBP17.92■□□□□ 0.46
PTCH1-202ENST00000375271 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
PTCH1-202ENST00000375271 JAG2Q9Y219 1238 aa17.92■□□□□ 0.46
PTCH1-202ENST00000375271 IGF2BP3O00425 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTCH1-202ENST00000375271 TNNI2P48788 182 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 RASA3Q14644 834 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
PTCH1-202ENST00000375271 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 CERS5Q8N5B7 392 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 CD99L2Q8TCZ2 262 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 TMEM106CQ9BVX2 250 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 IL16Q14005 1332 aa17.91■□□□□ 0.46
PTCH1-202ENST00000375271 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 SNAP23O00161 211 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 IL1R1P14778 569 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 SP3Q02447 781 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 CRHR2Q13324 411 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 NBPF12Q5TAG4 269 aaPredicted RBP17.9■□□□□ 0.46
PTCH1-202ENST00000375271 CSADQ9Y600 493 aa17.9■□□□□ 0.46
PTCH1-202ENST00000375271 CASP7P55210 303 aa17.89■□□□□ 0.45
PTCH1-202ENST00000375271 MFSD14BQ5SR56 506 aa17.89■□□□□ 0.45
PTCH1-202ENST00000375271 VPS37DQ86XT2 251 aa17.89■□□□□ 0.45
PTCH1-202ENST00000375271 PRMT6Q96LA8 375 aaPredicted RBP17.89■□□□□ 0.45
PTCH1-202ENST00000375271 ELP3Q9H9T3 547 aa17.89■□□□□ 0.45
PTCH1-202ENST00000375271 C9orf78Q9NZ63 289 aaPredicted RBP17.89■□□□□ 0.45
PTCH1-202ENST00000375271 TTF2Q9UNY4 1162 aaKnown RBP17.89■□□□□ 0.45
PTCH1-202ENST00000375271 PTPN22Q9Y2R2 807 aa17.89■□□□□ 0.45
PTCH1-202ENST00000375271 SSC5DA1L4H1 1573 aa17.88■□□□□ 0.45
PTCH1-202ENST00000375271 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
PTCH1-202ENST00000375271 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
PTCH1-202ENST00000375271 NBPF11Q86T75 865 aa17.88■□□□□ 0.45
PTCH1-202ENST00000375271 OPTNQ96CV9 577 aa17.88■□□□□ 0.45
PTCH1-202ENST00000375271 PCDHAC2Q9Y5I4 1007 aa17.88■□□□□ 0.45
PTCH1-202ENST00000375271 TAF1CQ15572 869 aaPredicted RBP17.87■□□□□ 0.45
PTCH1-202ENST00000375271 ZFYVE28Q9HCC9 887 aa17.87■□□□□ 0.45
PTCH1-202ENST00000375271 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
PTCH1-202ENST00000375271 POTEFA5A3E0 1075 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 USP2O75604 605 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-202ENST00000375271 HIBADHP31937 336 aaKnown RBP17.86■□□□□ 0.45
PTCH1-202ENST00000375271 KIF22Q14807 665 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 SLC4A8Q2Y0W8 1093 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 SLC9C1Q4G0N8 1177 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 ZNF70Q9UC06 446 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-202ENST00000375271 SERPINA10Q9UK55 444 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-202ENST00000375271 A0A1B0GUL6 1792 aa17.86■□□□□ 0.45
PTCH1-202ENST00000375271 CCL15-CCL14A0A0B4J2E2 113 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 TCP10L2B9ZVM9 353 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 F6X3S4 739 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 GRM8O00222 908 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 GTF2A2P52657 109 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 FOXO4P98177 505 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 CCL15Q16663 113 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
PTCH1-202ENST00000375271 ZNF594Q96JF6 807 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-202ENST00000375271 TDRD3Q9H7E2 651 aaKnown RBP17.85■□□□□ 0.45
PTCH1-202ENST00000375271 LAMB1P07942 1786 aa17.84■□□□□ 0.45
PTCH1-202ENST00000375271 FAM205AQ6ZU69 1335 aa17.84■□□□□ 0.45
PTCH1-202ENST00000375271 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
PTCH1-202ENST00000375271 HABP4Q5JVS0 413 aaKnown RBP17.84■□□□□ 0.45
PTCH1-202ENST00000375271 SLC4A10Q6U841 1118 aa17.84■□□□□ 0.45
PTCH1-202ENST00000375271 OTUD5Q96G74 571 aa17.84■□□□□ 0.45
PTCH1-202ENST00000375271 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.44
PTCH1-202ENST00000375271 GJA5P36382 358 aa17.83■□□□□ 0.44
PTCH1-202ENST00000375271 GYG1P46976 350 aa17.83■□□□□ 0.44
PTCH1-202ENST00000375271 BEND3Q5T5X7 828 aa17.83■□□□□ 0.44
PTCH1-202ENST00000375271 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms