RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 STOML1Q9UBI4 398 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 SEPT3Q9UH03 358 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 KANK4Q5T7N3 995 aaPredicted RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 FSIP1Q8NA03 581 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 TMED10P49755 219 aaKnown RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 TRIM68Q6AZZ1 485 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 MSANTD4Q8NCY6 345 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 NRDE2Q9H7Z3 1164 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 STRN4Q9NRL3 753 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 MATR3P43243 847 aaKnown RBP eCLIP7.43□□□□□ -1.224e-8■■■■■ 32.1
UBR4-204ENST00000375254 TMTC2Q8N394 836 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 BICDL2A1A5D9 508 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 RRP7AQ9Y3A4 280 aaKnown RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 KRR1Q13601 381 aaKnown RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 ZNF449Q6P9G9 518 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 SYKP43405 635 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 SH2D4AQ9H788 454 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 ANGPTL2Q9UKU9 493 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 CYLC2Q14093 348 aaPredicted RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 PHBP35232 272 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 LIG3P49916 1009 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 IKQ13123 557 aaPredicted RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 NOX5Q96PH1 765 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 UBAC1Q9BSL1 405 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBR4-204ENST00000375254 A0A1B0GW55 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L2P0CJ85 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L3P0CJ86 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L4P0CJ87 422 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L5P0CJ88 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L6P0CJ89 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4L7P0CJ90 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 AFAP1L2Q8N4X5 818 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 TBC1D22AQ8WUA7 517 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DUX4Q9UBX2 424 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 SYCE1Q8N0S2 351 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 MLKLQ8NB16 471 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 DACT1Q9NYF0 836 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 AKNAQ7Z591 1439 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GOLGA8QA0A0J9YX86 632 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GOLGA8OA6NCC3 632 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GOLGA8NF8WBI6 632 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GOLGA8AA7E2F4 631 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 GOLGA8BA8MQT2 603 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 EIF2S1P05198 315 aaKnown RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 HSPA8P11142 646 aaKnown RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 EIF2S2P20042 333 aaKnown RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 FGFR1OP2Q9NVK5 253 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 CDC25BP30305 580 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 ANKRD20A4Q4UJ75 823 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 ANKRD20A8PQ5CZ79 823 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 ANKRD20A2Q5SQ80 823 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 ANKRD20A1Q5TYW2 823 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 APBB1IPQ7Z5R6 666 aaPredicted RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 BICD1Q96G01 975 aa7.42□□□□□ -1.22
UBR4-204ENST00000375254 IQSEC3Q9UPP2 1182 aaPredicted RBP7.42□□□□□ -1.22
UBR4-204ENST00000375254 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 NPHP3Q7Z494 1330 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 A0A087WZG4 1122 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 CCT5P48643 541 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 MUM1L1Q5H9M0 696 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 ABTB1Q969K4 478 aaPredicted RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 KANK1Q14678 1352 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 GNGT1P63211 74 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 IWS1Q96ST2 819 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 E7EVH7 732 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 CPLX3Q8WVH0 158 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 ELL2O00472 640 aaPredicted RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 RPSAP08865 295 aaKnown RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 NBPF14Q5TI25 921 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 INAQ16352 499 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 MAP7D3Q8IWC1 876 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 TCP11L2Q8N4U5 519 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 ADAM21Q9UKJ8 722 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 CTNNA2P26232 953 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 RIOK1Q9BRS2 568 aaKnown RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 SEPT10Q9P0V9 454 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 MTIF2P46199 727 aaKnown RBP7.41□□□□□ -1.22
UBR4-204ENST00000375254 MMRN2Q9H8L6 949 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 TBC1D9Q6ZT07 1266 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 CARD6Q9BX69 1037 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 KLC4Q9NSK0 619 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 STXBP4Q6ZWJ1 553 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 ARMCX6Q7L4S7 300 aa7.41□□□□□ -1.22
UBR4-204ENST00000375254 OCA2Q04671 838 aa7.4□□□□□ -1.22
UBR4-204ENST00000375254 NLRP7Q8WX94 980 aa7.4□□□□□ -1.22
UBR4-204ENST00000375254 EVC2Q86UK5 1308 aa7.4□□□□□ -1.22
UBR4-204ENST00000375254 TPD52P55327 224 aaPredicted RBP7.4□□□□□ -1.22
UBR4-204ENST00000375254 E2F6O75461 281 aa7.4□□□□□ -1.22
UBR4-204ENST00000375254 ARHGAP45Q92619 1136 aa7.4□□□□□ -1.22
UBR4-204ENST00000375254 THOC1Q96FV9 657 aaKnown RBP7.4□□□□□ -1.22
UBR4-204ENST00000375254 GSTA2P09210 222 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms