RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MAFFQ9ULX9 164 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 SRGNP10124 158 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 ANKRD13BQ86YJ7 626 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 PGBD3Q8N328 593 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 ZNF713Q8N859 430 aaPredicted RBP10.59□□□□□ -0.71
UBR4-201ENST00000375218 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 A0A1W2PRQ8 180 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 A6NCN8 305 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 PRAM1Q96QH2 718 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 ATF3P18847 181 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
UBR4-201ENST00000375218 JAKMIP3Q5VZ66 844 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 DNAJC25Q9H1X3 360 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 GLI3P10071 1580 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 FAM135BQ49AJ0 1406 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 NUTM2FA1L443 756 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 OATP04181 439 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 SETSIPP0DME0 302 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 RASA1P20936 1047 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
UBR4-201ENST00000375218 GOLGA1Q92805 767 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 SCAMP3O14828 347 aaKnown RBP10.58□□□□□ -0.72
UBR4-201ENST00000375218 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 AGAP9Q5VTM2 703 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 TEX19Q8NA77 164 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 SMCR8Q8TEV9 937 aaPredicted RBP10.58□□□□□ -0.72
UBR4-201ENST00000375218 LARP6Q9BRS8 491 aaKnown RBP10.58□□□□□ -0.72
UBR4-201ENST00000375218 ODF2LQ9ULJ1 636 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 NFAT5O94916 1531 aa10.58□□□□□ -0.72
UBR4-201ENST00000375218 TMCO5BA8MYB1 307 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 CAND2O75155 1236 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 MYL3P08590 195 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 INO80DQ53TQ3 878 aaPredicted RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 RRP15Q9Y3B9 282 aaKnown RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 LETM1O95202 739 aaPredicted RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 EIF2AK1Q9BQI3 630 aaKnown RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 UTP6Q9NYH9 597 aaKnown RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 DDX49Q9Y6V7 483 aaKnown RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 NDUFV2P19404 249 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 TNNT3P45378 269 aaPredicted RBP10.57□□□□□ -0.72
UBR4-201ENST00000375218 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 SOGA3Q5TF21 947 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 ARNT2Q9HBZ2 717 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 IRAK4Q9NWZ3 460 aa10.57□□□□□ -0.72
UBR4-201ENST00000375218 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 TAGLN3Q9UI15 199 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 PCDHGB7Q9Y5F8 929 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 MED1Q15648 1581 aaPredicted RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 ABL1P00519 1130 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 OVOS2A0A0J9YW53 1432 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 OVOS2Q6IE36 1432 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 ANKRD36BQ8N2N9 1353 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 FAM208AQ9UK61 1670 aaKnown RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 H0Y3Z8 333 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 H0YHG0 523 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 TPPPO94811 219 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 CAPN2P17655 700 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 SARNPP82979 210 aaKnown RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 MAATS1Q7Z4T9 603 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 FBXO33Q7Z6M2 555 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 ELOA2Q8IYF1 753 aaPredicted RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 ERCC4Q92889 916 aaPredicted RBP10.56□□□□□ -0.72
UBR4-201ENST00000375218 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
UBR4-201ENST00000375218 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 KRT77Q7Z794 578 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 TBC1D20Q96BZ9 403 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 INSRP06213 1382 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 GPR37O15354 613 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 BTN2A1Q7KYR7 527 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 E2F7Q96AV8 911 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
UBR4-201ENST00000375218 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 COMMD8Q9NX08 183 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 FYB1O15117 783 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 PPP1R37O75864 691 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 PLEKHF1Q96S99 279 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 FAM126AQ9BYI3 521 aaPredicted RBP10.55□□□□□ -0.72
UBR4-201ENST00000375218 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
UBR4-201ENST00000375218 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
UBR4-201ENST00000375218 TRPC1P48995 793 aa10.55□□□□□ -0.72
UBR4-201ENST00000375218 NEFHP12036 1026 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms