RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 MLH3Q9UHC1 1453 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 TUBB4BP68371 445 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 PRDM15P57071 1507 aaPredicted RBP22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 ZNF496Q96IT1 587 aaPredicted RBP22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 CABP5Q9NP86 173 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 PARP10Q53GL7 1025 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 GIGYF1O75420 1035 aaPredicted RBP22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 HELBQ8NG08 1087 aaPredicted RBP22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 PTGS1P23219 599 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 FAM89AQ96GI7 184 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 PKNOX2Q96KN3 472 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.28■■□□□ 1.168e-7■■■■■ 78.2
TGFBR1-201ENST00000374990 ANGEL1Q9UNK9 670 aaKnown RBP22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 ATP7BP35670 1465 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 OSBPL3Q9H4L5 887 aa22.28■■□□□ 1.16
TGFBR1-201ENST00000374990 ELP1O95163 1332 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 ERICH4A6NGS2 130 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 MYL5Q02045 173 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 KLHDC4Q8TBB5 520 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 PLCG2P16885 1265 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 SEPT7Q16181 437 aaKnown RBP22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 IQUBQ8NA54 791 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 CALCOCO1Q9P1Z2 691 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 CCDC175P0C221 793 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 KRT222Q8N1A0 295 aa22.27■■□□□ 1.16
TGFBR1-201ENST00000374990 ERMNQ8TAM6 284 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 ARFGAP3Q9NP61 516 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 DHX58Q96C10 678 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 CLSTN2Q9H4D0 955 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 TCERG1LQ5VWI1 586 aa22.26■■□□□ 1.15
TGFBR1-201ENST00000374990 KRT2P35908 639 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 ST5P78524 1137 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 ANKRD2Q9GZV1 360 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 IFNKQ9P0W0 207 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 IBTKQ9P2D0 1353 aaPredicted RBP22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 DESP17661 470 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 CKAP4Q07065 602 aaKnown RBP22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 LEO1Q8WVC0 666 aaPredicted RBP22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 C6orf50Q9HD87 102 aa22.25■■□□□ 1.15
TGFBR1-201ENST00000374990 TAX1BP1Q86VP1 789 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 MBD4O95243 580 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 LTKP29376 864 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 XAGE2Q96GT9 111 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 RBM28Q9NW13 759 aaKnown RBP22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 CCDC129Q6ZRS4 1044 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 PPP1R1BQ9UD71 204 aaPredicted RBP22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 A0A1B0GVL5 298 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 PPP2R5BQ15173 497 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 ANO1Q5XXA6 986 aa22.24■■□□□ 1.15
TGFBR1-201ENST00000374990 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 DSCC1Q9BVC3 393 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 GPAA1O43292 621 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 ITGA6P23229 1130 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 ENOX2Q16206 610 aaKnown RBP22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 CTAGE15A4D2H0 777 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 POLR3GO15318 223 aaPredicted RBP22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 CTAGE8P0CG41 777 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 GNA11P29992 359 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 CTAGE6Q86UF2 777 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 CTAGE4Q8IX94 777 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 NEURL1BA8MQ27 555 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 PDE8AO60658 829 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 IFI16Q16666 785 aaKnown RBP22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 HEATR3Q7Z4Q2 680 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 ZNF804AQ7Z570 1209 aa22.23■■□□□ 1.15
TGFBR1-201ENST00000374990 NAPAP54920 295 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 MIGA1Q8NAN2 632 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 JADE2Q9NQC1 790 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 TUBBP07437 444 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 BEND3Q5T5X7 828 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 MCM9Q9NXL9 1143 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 PREX2Q70Z35 1606 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 FAM173BQ6P4H8 233 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 DEXIO95424 95 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 HSP90AA4PQ58FG1 418 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 DENND2AQ9ULE3 1009 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 CFAP74Q9C0B2 1584 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 ASIC1P78348 528 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 ACSBG1Q96GR2 724 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 SPAG5Q96R06 1193 aa22.22■■□□□ 1.15
TGFBR1-201ENST00000374990 YEATS2Q9ULM3 1422 aa22.21■■□□□ 1.15
TGFBR1-201ENST00000374990 KRT83P78385 493 aa22.21■■□□□ 1.15
TGFBR1-201ENST00000374990 CCDC172P0C7W6 258 aa22.21■■□□□ 1.15
TGFBR1-201ENST00000374990 TERF1P54274 439 aa22.21■■□□□ 1.15
TGFBR1-201ENST00000374990 TMEM63CQ9P1W3 806 aa22.21■■□□□ 1.15
TGFBR1-201ENST00000374990 A1BGP04217 495 aa22.2■■□□□ 1.15
TGFBR1-201ENST00000374990 TBCAO75347 108 aaKnown RBP22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 FAM107BQ9H098 131 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 KDRP35968 1356 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms