RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 LRRC24Q50LG9 513 aa20.96■□□□□ 0.95
PHF1-201ENST00000374512 A0A1B0GUL7 405 aa20.95■□□□□ 0.94
PHF1-201ENST00000374512 CCT2P78371 535 aaKnown RBP20.95■□□□□ 0.94
PHF1-201ENST00000374512 PPP4R3BQ5MIZ7 849 aa20.95■□□□□ 0.94
PHF1-201ENST00000374512 MRPS27Q92552 414 aaKnown RBP20.95■□□□□ 0.94
PHF1-201ENST00000374512 KCND1Q9NSA2 647 aa20.95■□□□□ 0.94
PHF1-201ENST00000374512 DHX8Q14562 1220 aaKnown RBP20.94■□□□□ 0.94
PHF1-201ENST00000374512 TPD52L1Q16890 204 aaPredicted RBP20.94■□□□□ 0.94
PHF1-201ENST00000374512 CCDC144BQ3MJ40 725 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 CCDC144CPQ8IYA2 1237 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 FSIP1Q8NA03 581 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
PHF1-201ENST00000374512 C16orf45Q96MC5 204 aaPredicted RBP20.94■□□□□ 0.94
PHF1-201ENST00000374512 TOGARAM1Q9Y4F4 1720 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 ISCA1Q9BUE6 129 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
PHF1-201ENST00000374512 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
PHF1-201ENST00000374512 FMR1NBQ8N0W7 255 aaPredicted RBP20.93■□□□□ 0.94
PHF1-201ENST00000374512 KCNG4Q8TDN1 519 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 FEZ1Q99689 392 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 BPIFA3Q9BQP9 254 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 AKAP2Q9Y2D5 859 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 YEATS4O95619 227 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 GSDMDP57764 484 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 UTP14CQ5TAP6 766 aaKnown RBP20.93■□□□□ 0.94
PHF1-201ENST00000374512 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
PHF1-201ENST00000374512 CCDC112Q8NEF3 446 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 WDR19Q8NEZ3 1342 aa20.93■□□□□ 0.94
PHF1-201ENST00000374512 TCIRG1Q13488 830 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 IMMTQ16891 758 aaKnown RBP20.92■□□□□ 0.94
PHF1-201ENST00000374512 CCDC57Q2TAC2 916 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 NCOA5Q9HCD5 579 aaKnown RBP20.92■□□□□ 0.94
PHF1-201ENST00000374512 POLR3EQ9NVU0 708 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 IMPACTQ9P2X3 320 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 CCDC158Q5M9N0 1113 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 FTOQ9C0B1 505 aaKnown RBP eCLIP20.92■□□□□ 0.94
PHF1-201ENST00000374512 PCDHA7Q9UN72 937 aa20.92■□□□□ 0.94
PHF1-201ENST00000374512 FDPSP14324 419 aaKnown RBP20.91■□□□□ 0.94
PHF1-201ENST00000374512 PUS3Q9BZE2 481 aaKnown RBP20.91■□□□□ 0.94
PHF1-201ENST00000374512 SLFNL1Q499Z3 407 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 LINC00301Q8NCQ3 95 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 M0R2C6 588 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 KIF2AO00139 706 aaPredicted RBP20.9■□□□□ 0.94
PHF1-201ENST00000374512 TRIM28Q13263 835 aaKnown RBP20.9■□□□□ 0.94
PHF1-201ENST00000374512 CEP135Q66GS9 1140 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 SDF4Q9BRK5 362 aa20.9■□□□□ 0.94
PHF1-201ENST00000374512 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
PHF1-201ENST00000374512 SKILP12757 684 aa20.89■□□□□ 0.94
PHF1-201ENST00000374512 NCBP1Q09161 790 aaKnown RBP20.89■□□□□ 0.94
PHF1-201ENST00000374512 OSBP2Q969R2 916 aa20.89■□□□□ 0.94
PHF1-201ENST00000374512 ARID3AQ99856 593 aa20.89■□□□□ 0.94
PHF1-201ENST00000374512 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.94
PHF1-201ENST00000374512 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
PHF1-201ENST00000374512 NYAP1Q6ZVC0 841 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 C8orf76Q96K31 380 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 OSBPL5Q9H0X9 879 aaPredicted RBP20.89■□□□□ 0.93
PHF1-201ENST00000374512 BTG4Q9NY30 223 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 KIAA1468Q9P260 1216 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 PRDM4Q9UKN5 801 aa20.89■□□□□ 0.93
PHF1-201ENST00000374512 STK38Q15208 465 aa20.88■□□□□ 0.93
PHF1-201ENST00000374512 SF3A1Q15459 793 aaKnown RBP20.88■□□□□ 0.93
PHF1-201ENST00000374512 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
PHF1-201ENST00000374512 CGNQ9P2M7 1197 aaKnown RBP20.88■□□□□ 0.93
PHF1-201ENST00000374512 PCCAP05165 728 aaPredicted RBP20.88■□□□□ 0.93
PHF1-201ENST00000374512 FOSBP53539 338 aa20.88■□□□□ 0.93
PHF1-201ENST00000374512 PTPN14Q15678 1187 aa20.88■□□□□ 0.93
PHF1-201ENST00000374512 PLA2G12BQ9BX93 195 aa20.88■□□□□ 0.93
PHF1-201ENST00000374512 GTPBP4Q9BZE4 634 aaKnown RBP20.88■□□□□ 0.93
PHF1-201ENST00000374512 ZNF330Q9Y3S2 320 aaPredicted RBP20.88■□□□□ 0.93
PHF1-201ENST00000374512 COL14A1Q05707 1796 aaKnown RBP20.87■□□□□ 0.93
PHF1-201ENST00000374512 DDX60Q8IY21 1712 aaKnown RBP20.87■□□□□ 0.93
PHF1-201ENST00000374512 CCDC69A6NI79 296 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 FKBP4Q02790 459 aaKnown RBP eCLIP20.87■□□□□ 0.93
PHF1-201ENST00000374512 DMTNQ08495 405 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 TTC39AQ5SRH9 613 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 GORABQ5T7V8 394 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 NCOA7Q8NI08 942 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 ITGB4P16144 1822 aa20.87■□□□□ 0.93
PHF1-201ENST00000374512 TPM4P67936 248 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 GUCY1B3Q02153 619 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
PHF1-201ENST00000374512 AOPEPQ8N6M6 819 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 APPBP2Q92624 585 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 SPTLC2O15270 562 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 PRC1O43663 620 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 ZSCAN20P17040 1043 aaPredicted RBP20.86■□□□□ 0.93
PHF1-201ENST00000374512 CCZ1BP86790 482 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 CCZ1P86791 482 aaPredicted RBP20.86■□□□□ 0.93
PHF1-201ENST00000374512 ATP2B3Q16720 1220 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 TTLL5Q6EMB2 1281 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 XAGE2Q96GT9 111 aa20.86■□□□□ 0.93
PHF1-201ENST00000374512 KCNJ6P48051 423 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 TAF7LQ5H9L4 462 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms