RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TNMDQ9H2S6 317 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 IL2RBP14784 551 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 H2AFXP16104 143 aaPredicted RBP20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 WASHC4Q2M389 1173 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 HAUS7Q99871 368 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 GYS2P54840 703 aa20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 HLFQ16534 295 aa20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 KRBA2Q6ZNG9 492 aa20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 LRRN4CLQ8ND94 238 aa20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 ERCC4Q92889 916 aaPredicted RBP20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 KCNB2Q92953 911 aa20.14■□□□□ 0.82
LDLRAP1-201ENST00000374338 WDR17Q8IZU2 1322 aa20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 MYO1CO00159 1063 aa20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 SLU7O95391 586 aaKnown RBP20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 OTUD7BQ6GQQ9 843 aa20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 FILIP1Q7Z7B0 1213 aa20.14■□□□□ 0.81
LDLRAP1-201ENST00000374338 SCRN1Q12765 414 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 NYAP1Q6ZVC0 841 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 GJB4Q9NTQ9 266 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 LCMT1Q9UIC8 334 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 CAMTA1Q9Y6Y1 1673 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 ALS2Q96Q42 1657 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 M0R2C6 588 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 TXLNBQ8N3L3 684 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 ATP6V1DQ9Y5K8 247 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 PNMA6AP0CW24 399 aaPredicted RBP20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 KBTBD3Q8NAB2 608 aa20.13■□□□□ 0.81
LDLRAP1-201ENST00000374338 CASQ1P31415 396 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 ZNF165P49910 485 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 TEX35Q5T0J7 233 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 PCDH11XQ9BZA7 1347 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 AFDNP55196 1824 aaKnown RBP20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 NR1I2O75469 434 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 ICE2Q659A1 982 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 PIGBQ92521 554 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 TBC1D2BQ9UPU7 963 aa20.12■□□□□ 0.81
LDLRAP1-201ENST00000374338 H3BQV1 296 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 CLCN6P51797 869 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 IFFO2Q5TF58 517 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 GOLGA6L4A6NEF3 574 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 EYA2O00167 538 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 POLR3GO15318 223 aaPredicted RBP20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 BRD2P25440 801 aaKnown RBP20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 CTR9Q6PD62 1173 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 SPATA32Q96LK8 384 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 BTG4Q9NY30 223 aa20.11■□□□□ 0.81
LDLRAP1-201ENST00000374338 ERCC6LQ2NKX8 1250 aa20.1■□□□□ 0.81
LDLRAP1-201ENST00000374338 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 KRT85P78386 507 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 ST5P78524 1137 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 NKX2-3Q8TAU0 364 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 MAST3O60307 1309 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 ZAP70P43403 619 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 BICD2Q8TD16 824 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 CEP126Q9P2H0 1117 aa20.09■□□□□ 0.81
LDLRAP1-201ENST00000374338 SMARCE1Q969G3 411 aa20.08■□□□□ 0.81
LDLRAP1-201ENST00000374338 XAGE2Q96GT9 111 aa20.08■□□□□ 0.81
LDLRAP1-201ENST00000374338 CRYBG1Q9Y4K1 1723 aa20.08■□□□□ 0.81
LDLRAP1-201ENST00000374338 COL18A1P39060 1754 aa20.08■□□□□ 0.8
LDLRAP1-201ENST00000374338 SKILP12757 684 aa20.08■□□□□ 0.8
LDLRAP1-201ENST00000374338 RXRAP19793 462 aa20.08■□□□□ 0.8
LDLRAP1-201ENST00000374338 TTC39AQ5SRH9 613 aa20.08■□□□□ 0.8
LDLRAP1-201ENST00000374338 CCDC191Q8NCU4 936 aa20.08■□□□□ 0.8
LDLRAP1-201ENST00000374338 ZSCAN26Q16670 478 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 LRRC8AQ8IWT6 810 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 INCENPQ9NQS7 918 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 E7EWF7 191 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 TPM4P67936 248 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 PGBD1Q96JS3 809 aa20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 PUS7LQ9H0K6 701 aaKnown RBP20.07■□□□□ 0.8
LDLRAP1-201ENST00000374338 GREM2Q9H772 168 aa20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 IL15P40933 162 aaPredicted RBP20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 C11orf57Q6ZUT1 292 aaPredicted RBP20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 CTDNEP1O95476 244 aa20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 LEO1Q8WVC0 666 aaPredicted RBP20.06■□□□□ 0.8
LDLRAP1-201ENST00000374338 ZRANB2O95218 330 aaKnown RBP eCLIP20.05■□□□□ 0.8
LDLRAP1-201ENST00000374338 ANKRD1Q15327 319 aa20.05■□□□□ 0.8
LDLRAP1-201ENST00000374338 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
LDLRAP1-201ENST00000374338 NCAPGQ9BPX3 1015 aa20.05■□□□□ 0.8
LDLRAP1-201ENST00000374338 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
LDLRAP1-201ENST00000374338 CLGNO14967 610 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms