RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 ZNF408Q9H9D4 720 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 NUCB1Q02818 461 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 ANAPC4Q9UJX5 808 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX30-201ENST00000374232 TACC1O75410 805 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 CRCPO75575 148 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 F13A1P00488 732 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
SNX30-201ENST00000374232 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
SNX30-201ENST00000374232 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.4■□□□□ 0.22
SNX30-201ENST00000374232 SMC6Q96SB8 1091 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 NEMFO60524 1076 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 CFAP157Q5JU67 520 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
SNX30-201ENST00000374232 MGARPQ8TDB4 240 aa16.4■□□□□ 0.22
SNX30-201ENST00000374232 BEND3Q5T5X7 828 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 FAM169AQ9Y6X4 670 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 CDK13Q14004 1512 aaKnown RBP16.39■□□□□ 0.21
SNX30-201ENST00000374232 FMNL3Q8IVF7 1028 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 TTLL3Q9Y4R7 772 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 LRPPRCP42704 1394 aaKnown RBP16.39■□□□□ 0.21
SNX30-201ENST00000374232 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 MCM9Q9NXL9 1143 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 ARID4AP29374 1257 aaPredicted RBP16.39■□□□□ 0.21
SNX30-201ENST00000374232 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 TFCP2Q12800 502 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 KIF5AQ12840 1032 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 PPP1R12CQ9BZL4 782 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
SNX30-201ENST00000374232 AGTPBP1Q9UPW5 1226 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 CSPG5O95196 566 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
SNX30-201ENST00000374232 MCMDC2Q4G0Z9 681 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 KANK3Q6NY19 840 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 HSPA1LP34931 641 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
SNX30-201ENST00000374232 ANKS4BQ8N8V4 417 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNX30-201ENST00000374232 USTQ9Y2C2 406 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 TSC1Q92574 1164 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
SNX30-201ENST00000374232 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 SPTLC2O15270 562 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 KRT2P35908 639 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 GABPAQ06546 454 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 LETM2Q2VYF4 491 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 STAMQ92783 540 aa16.38■□□□□ 0.21
SNX30-201ENST00000374232 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 SPDYE3A6NKU9 549 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 LDHCP07864 332 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 RNF34Q969K3 372 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 PDE1AP54750 535 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 PPP1R12AO14974 1030 aaPredicted RBP16.37■□□□□ 0.21
SNX30-201ENST00000374232 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
SNX30-201ENST00000374232 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 TAB3Q8N5C8 712 aaPredicted RBP16.37■□□□□ 0.21
SNX30-201ENST00000374232 PAG1Q9NWQ8 432 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 EP400NLQ6ZTU2 488 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
SNX30-201ENST00000374232 MYL10Q9BUA6 226 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 BACH1O14867 736 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 KLHDC4Q8TBB5 520 aa16.37■□□□□ 0.21
SNX30-201ENST00000374232 CCT6BQ92526 530 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 PSMA7O14818 248 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 ZSCAN16Q9H4T2 348 aaPredicted RBP16.36■□□□□ 0.21
SNX30-201ENST00000374232 PTPRCP08575 1304 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 GJA3Q9Y6H8 435 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 BIRC2Q13490 618 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 CCDC170Q8IYT3 715 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
SNX30-201ENST00000374232 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
SNX30-201ENST00000374232 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 RFX1P22670 979 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 GOLGA6L9A6NEM1 432 aa16.35■□□□□ 0.21
SNX30-201ENST00000374232 CCNT1O60563 726 aaKnown RBP16.35■□□□□ 0.21
SNX30-201ENST00000374232 ZNF131P52739 623 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms