RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ATP7BP35670 1465 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 A0A087WUV0 522 aaPredicted RBP14.91□□□□□ -0.02
PRPF4-201ENST00000374198 JAK2O60674 1132 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 GLRX3O76003 335 aaKnown RBP14.91□□□□□ -0.02
PRPF4-201ENST00000374198 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 MIS18AQ9NYP9 233 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 PXDNQ92626 1479 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 CRYBG1Q9Y4K1 1723 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 SLC27A2O14975 620 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 RPS6KB1P23443 525 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 MAP2K2P36507 400 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 FSIP1Q8NA03 581 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 ANKRD20A12PQ8NF67 263 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 PPP2R2CQ9Y2T4 447 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
PRPF4-201ENST00000374198 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 FLIIQ13045 1269 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 SUFUQ9UMX1 484 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
PRPF4-201ENST00000374198 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 PPFIA4O75335 1185 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 USP5P45974 858 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 POLA2Q14181 598 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 FTOQ9C0B1 505 aaKnown RBP eCLIP14.9□□□□□ -0.02
PRPF4-201ENST00000374198 MED4Q9NPJ6 270 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
PRPF4-201ENST00000374198 CRB1P82279 1406 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 GOLGA6L9A6NEM1 432 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 FANCCQ00597 558 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 MICALL1Q8N3F8 863 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 KIFC2Q96AC6 838 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 FMNL2Q96PY5 1086 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 LRP6O75581 1613 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 NCAPHQ15003 741 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 DNAJC21Q5F1R6 531 aaKnown RBP14.89□□□□□ -0.03
PRPF4-201ENST00000374198 CNNM3Q8NE01 707 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 DHX58Q96C10 678 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 L1RE1Q9UN81 338 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
PRPF4-201ENST00000374198 FMR1NBQ8N0W7 255 aaPredicted RBP14.88□□□□□ -0.03
PRPF4-201ENST00000374198 FAM71BQ8TC56 605 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 CCDC196A0A1B0GTZ2 297 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 ARHGAP6O43182 974 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 ADAMTS2O95450 1211 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 EIF5P55010 431 aaKnown RBP14.88□□□□□ -0.03
PRPF4-201ENST00000374198 BICC1Q9H694 974 aaKnown RBP14.88□□□□□ -0.03
PRPF4-201ENST00000374198 ANKZF1Q9H8Y5 726 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 RAB21Q9UL25 225 aa14.88□□□□□ -0.03
PRPF4-201ENST00000374198 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 ERLIN1O75477 346 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 RRS1Q15050 365 aaKnown RBP14.87□□□□□ -0.03
PRPF4-201ENST00000374198 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 PLEKHA4Q9H4M7 779 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 LMOD1P29536 600 aaPredicted RBP14.87□□□□□ -0.03
PRPF4-201ENST00000374198 ME1P48163 572 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 CHMP4BP1P59074 171 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 HSP90B2PQ58FF3 399 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 USP28Q96RU2 1077 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 FAM107BQ9H098 131 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
PRPF4-201ENST00000374198 ITSN1Q15811 1721 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 TMEM139Q8IV31 216 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 NME9Q86XW9 330 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 ABCB6Q9NP58 842 aa14.86□□□□□ -0.03
PRPF4-201ENST00000374198 GOLGA8FQ08AF8 430 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 GOLGA8DPQ0D2H9 430 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 MSANTD4Q8NCY6 345 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 MRPS27Q92552 414 aaKnown RBP14.85□□□□□ -0.03
PRPF4-201ENST00000374198 CCDC102AQ96A19 550 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ZNF396Q96N95 335 aaPredicted RBP14.85□□□□□ -0.03
PRPF4-201ENST00000374198 C8orf37Q96NL8 207 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ZSWIM4Q9H7M6 989 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 SUGCTQ9HAC7 445 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ERLIN2O94905 339 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 NLRP12P59046 1061 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 DHX37Q8IY37 1157 aaKnown RBP14.85□□□□□ -0.03
PRPF4-201ENST00000374198 KAT2BQ92831 832 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 PNKPQ96T60 521 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 TAF6LQ9Y6J9 622 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 CUTAO60888 179 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 PHACTR2O75167 634 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 MNAT1P51948 309 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 UBASH3AP57075 661 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms