RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 GOLIM4O00461 696 aa17.77■□□□□ 0.43
SMPDL3B-201ENST00000373888 CYP2E1P05181 493 aaPredicted RBP17.77■□□□□ 0.43
SMPDL3B-201ENST00000373888 AOC3Q16853 763 aa17.77■□□□□ 0.43
SMPDL3B-201ENST00000373888 EDC3Q96F86 508 aaKnown RBP17.77■□□□□ 0.43
SMPDL3B-201ENST00000373888 GOLGB1Q14789 3259 aaKnown RBP17.77■□□□□ 0.43
SMPDL3B-201ENST00000373888 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 TTF1Q15361 905 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 TICAM2Q86XR7 235 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 KBTBD3Q8NAB2 608 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 ANTXR1Q9H6X2 564 aa17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3B-201ENST00000373888 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
SMPDL3B-201ENST00000373888 SRCAPQ6ZRS2 3230 aa17.75■□□□□ 0.43
SMPDL3B-201ENST00000373888 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
SMPDL3B-201ENST00000373888 IARSP41252 1262 aaKnown RBP17.74■□□□□ 0.43
SMPDL3B-201ENST00000373888 DOK7Q18PE1 504 aa17.74■□□□□ 0.43
SMPDL3B-201ENST00000373888 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
SMPDL3B-201ENST00000373888 SALL1Q9NSC2 1324 aa17.74■□□□□ 0.43
SMPDL3B-201ENST00000373888 G3V3G9 751 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 ECE2O60344 883 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 CDC45O75419 566 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 WDR66Q8TBY9 1149 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 DOCK2Q92608 1830 aa17.73■□□□□ 0.43
SMPDL3B-201ENST00000373888 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 LARGE2Q8N3Y3 721 aa17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 COL4A5P29400 1685 aa17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 TBC1D9Q6ZT07 1266 aa17.72■□□□□ 0.43
SMPDL3B-201ENST00000373888 CHD4Q14839 1912 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 HIP1O00291 1037 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 IGSF3O75054 1194 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 CHMLP26374 656 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 RASSF7Q02833 373 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 ZGPATQ8N5A5 531 aaKnown RBP17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 TBC1D22AQ8WUA7 517 aa17.71■□□□□ 0.43
SMPDL3B-201ENST00000373888 GTF2IP78347 998 aa17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 CASC1Q6TDU7 716 aa17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 ARHGAP27Q6ZUM4 889 aa17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 JAG2Q9Y219 1238 aa17.7■□□□□ 0.42
SMPDL3B-201ENST00000373888 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 PRELPP51888 382 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 MAP3K12Q12852 859 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 TTLL5Q6EMB2 1281 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 LRP2BPQ9P2M1 347 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 SCN9AQ15858 1988 aa17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 ZNF646O15015 1829 aaPredicted RBP17.69■□□□□ 0.42
SMPDL3B-201ENST00000373888 RNF113AO15541 343 aaKnown RBP17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 MFSD14BQ5SR56 506 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 JDP2Q8WYK2 163 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 MYH7P12883 1935 aa17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 MYO5AQ9Y4I1 1855 aaKnown RBP17.68■□□□□ 0.42
SMPDL3B-201ENST00000373888 PSME4Q14997 1843 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 USP17L3A6NCW0 530 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 USP17L4A6NCW7 530 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 FKBP1AP62942 108 aaKnown RBP17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 USP17L1Q7RTZ2 530 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 MAST2Q6P0Q8 1798 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 PDE6AP16499 860 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 LMNB1P20700 586 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 PRDX5P30044 214 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 ADD2P35612 726 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 UBE3CQ15386 1083 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 DACT2Q5SW24 774 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
SMPDL3B-201ENST00000373888 CHGBP05060 677 aa17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 LDHBP07195 334 aaKnown RBP17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 GPR162Q16538 588 aa17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 ZMYM1Q5SVZ6 1142 aa17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
SMPDL3B-201ENST00000373888 RAD50Q92878 1312 aa17.65■□□□□ 0.42
SMPDL3B-201ENST00000373888 A0A0D9SFI3 127 aa17.65■□□□□ 0.42
SMPDL3B-201ENST00000373888 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
SMPDL3B-201ENST00000373888 CWC27Q6UX04 472 aaKnown RBP17.65■□□□□ 0.42
SMPDL3B-201ENST00000373888 CERS5Q8N5B7 392 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms