RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 ANKRD65E5RJM6 399 aa18.56■□□□□ 0.56
PBX3-204ENST00000373489 GTF2A1P52655 376 aaPredicted RBP18.56■□□□□ 0.56
PBX3-204ENST00000373489 GNG11P61952 73 aa18.56■□□□□ 0.56
PBX3-204ENST00000373489 GOLGA5Q8TBA6 731 aa18.56■□□□□ 0.56
PBX3-204ENST00000373489 WDR24Q96S15 920 aa18.56■□□□□ 0.56
PBX3-204ENST00000373489 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
PBX3-204ENST00000373489 HIP1O00291 1037 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 SRRTQ9BXP5 876 aaKnown RBP18.55■□□□□ 0.56
PBX3-204ENST00000373489 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 PTPDC1A2A3K4 754 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 TAF5LO75529 589 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 SF3A1Q15459 793 aaKnown RBP18.55■□□□□ 0.56
PBX3-204ENST00000373489 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
PBX3-204ENST00000373489 ATP8B1O43520 1251 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 TPM1P09493 284 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 PPP2R3AQ06190 1150 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 APOBRQ0VD83 1088 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 MCM6Q14566 821 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 NSUN7Q8NE18 718 aaKnown RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 ZNF396Q96N95 335 aaPredicted RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 ALDH8A1Q9H2A2 487 aaPredicted RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 VPS18Q9P253 973 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 XIRP1Q702N8 1843 aaKnown RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 SASH1O94885 1247 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 HSP90AA4PQ58FG1 418 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 OTUD7BQ6GQQ9 843 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
PBX3-204ENST00000373489 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
PBX3-204ENST00000373489 VWA3AA6NCI4 1184 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 SERPINC1P01008 464 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 TUBB4AP04350 444 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 NCAPHQ15003 741 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 KLHDC4Q8TBB5 520 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 TRPM3Q9HCF6 1732 aaPredicted RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 ACTN2P35609 894 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 LONRF2Q1L5Z9 754 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 RGPD2P0DJD1 1756 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 TMEM232C9JQI7 657 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 CCP110O43303 1012 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 SLC3A2P08195 630 aaKnown RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 KCNJ6P48051 423 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 UBASH3AP57075 661 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
PBX3-204ENST00000373489 BRINP3Q76B58 766 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 EXOC4Q96A65 974 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
PBX3-204ENST00000373489 RGS22Q8NE09 1264 aa18.52■□□□□ 0.56
PBX3-204ENST00000373489 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.55
PBX3-204ENST00000373489 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.55
PBX3-204ENST00000373489 SMARCC2Q8TAQ2 1214 aa18.52■□□□□ 0.55
PBX3-204ENST00000373489 PDE11AQ9HCR9 933 aa18.52■□□□□ 0.55
PBX3-204ENST00000373489 PPP2R2CQ9Y2T4 447 aa18.52■□□□□ 0.55
PBX3-204ENST00000373489 CYP21A2P08686 494 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
PBX3-204ENST00000373489 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
PBX3-204ENST00000373489 LEKR1Q6ZMV7 388 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 CHST3Q7LGC8 479 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 ARHGEF25Q86VW2 580 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 CLIC4Q9Y696 253 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 HOXB7P09629 217 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
PBX3-204ENST00000373489 STK38Q15208 465 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 PDILTQ8N807 584 aa18.51■□□□□ 0.55
PBX3-204ENST00000373489 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 N4BP1O75113 896 aaKnown RBP18.5■□□□□ 0.55
PBX3-204ENST00000373489 TEFQ10587 303 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 ICE2Q659A1 982 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 COL15A1P39059 1388 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 CRYBG1Q9Y4K1 1723 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 KRT32Q14532 448 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 KARSQ15046 597 aaKnown RBP18.5■□□□□ 0.55
PBX3-204ENST00000373489 SKIDA1Q1XH10 827 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 DHX58Q96C10 678 aa18.5■□□□□ 0.55
PBX3-204ENST00000373489 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
PBX3-204ENST00000373489 NLRP12P59046 1061 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 ADALQ6DHV7 355 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 SUGCTQ9HAC7 445 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 LOC102724159A0A0B4J2E5 919 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
PBX3-204ENST00000373489 PWP2Q15269 919 aaKnown RBP18.49■□□□□ 0.55
PBX3-204ENST00000373489 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 PACS2Q86VP3 889 aa18.49■□□□□ 0.55
PBX3-204ENST00000373489 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms