RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 USP44Q9H0E7 712 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 SSR1P43307 286 aaKnown RBP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 IFIT1BQ5T764 474 aaKnown RBP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 MYOM1P52179 1685 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 ABCC4O15439 1325 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 GOLGA6L7A0A1B0GV03 622 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 JAK2O60674 1132 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 HSPA4P34932 840 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 TSC1Q92574 1164 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 DRC1Q96MC2 740 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
CSMD2-204ENST00000373380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSMD2-204ENST00000373380 PPP1R12BO60237 982 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 LZTFL1Q9NQ48 299 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 ATP7BP35670 1465 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 A0A1B0GUL7 405 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
CSMD2-204ENST00000373380 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 UTP14AQ9BVJ6 771 aaKnown RBP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSMD2-204ENST00000373380 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 IQSEC2Q5JU85 1478 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
CSMD2-204ENST00000373380 MNAT1P51948 309 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-204ENST00000373380 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 NOP2P46087 812 aaKnown RBP12.42□□□□□ -0.42
CSMD2-204ENST00000373380 SPECC1Q5M775 1068 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 MED14O60244 1454 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 TICAM2Q86XR7 235 aa12.42□□□□□ -0.42
CSMD2-204ENST00000373380 STAT6P42226 847 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 AMPD3Q01432 767 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 ACSBG1Q96GR2 724 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
CSMD2-204ENST00000373380 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
CSMD2-204ENST00000373380 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 KCNQ3O43525 872 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 NAA16Q6N069 864 aaPredicted RBP12.41□□□□□ -0.42
CSMD2-204ENST00000373380 MAGEB6Q8N7X4 407 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
CSMD2-204ENST00000373380 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
CSMD2-204ENST00000373380 B4E1Z4 1266 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 MCM3P25205 808 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 ME3Q16798 604 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
CSMD2-204ENST00000373380 CTAGE15A4D2H0 777 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 EYA2O00167 538 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
CSMD2-204ENST00000373380 BAG3O95817 575 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 CTAGE8P0CG41 777 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
CSMD2-204ENST00000373380 CTAGE6Q86UF2 777 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 CTAGE4Q8IX94 777 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 LDHCP07864 332 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 CCDC175P0C221 793 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 NIP7Q9Y221 180 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSMD2-204ENST00000373380 AATKQ6ZMQ8 1374 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 PHACTR2O75167 634 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSMD2-204ENST00000373380 PTH1RQ03431 593 aa12.4□□□□□ -0.42
CSMD2-204ENST00000373380 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms