RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 SSBP05455 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHD6-203ENST00000373233 PWP2Q15269 919 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 CCDC47Q96A33 483 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 BICC1Q9H694 974 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 ANKRD62A6NC57 917 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 UVSSAQ2YD98 709 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
CHD6-203ENST00000373233 LUC7LQ9NQ29 371 aaKnown RBP7.53□□□□□ -1.2
CHD6-203ENST00000373233 CRB1P82279 1406 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 STK38Q15208 465 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
CHD6-203ENST00000373233 ANKRD18BA2A2Z9 1011 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
CHD6-203ENST00000373233 NBPF5PQ86XG9 351 aaPredicted RBP7.53□□□□□ -1.2
CHD6-203ENST00000373233 MST1RQ04912 1400 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 EPS15P42566 896 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 WWC2Q6AWC2 1192 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 PLEKHM2Q8IWE5 1019 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 SPATA32Q96LK8 384 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 PHACTR2O75167 634 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 PDE1AP54750 535 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 SDSP20132 328 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 ZBTB17Q13105 803 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 ME1P48163 572 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 C6orf163Q5TEZ5 329 aa7.53□□□□□ -1.2
CHD6-203ENST00000373233 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.2
CHD6-203ENST00000373233 TRDNQ13061 729 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 CCDC113Q9H0I3 377 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 RBM27Q9P2N5 1060 aaKnown RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 LUC7L2Q9Y383 392 aaKnown RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 AFAP1L1Q8TED9 768 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 CCDC8Q9H0W5 538 aaPredicted RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 PCK1P35558 622 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 PLBD2Q8NHP8 589 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 BOLA2Q9H3K6 86 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 JRKLQ9Y4A0 524 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 AOX1Q06278 1338 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 CCDC196A0A1B0GTZ2 297 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 MYCNP04198 464 aaPredicted RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 CCDC150Q8NCX0 1101 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 GOLGA1Q92805 767 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 NWD1Q149M9 1564 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 ATRIPQ8WXE1 791 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 FAM208AQ9UK61 1670 aaKnown RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 PFDN1O60925 122 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 LACTBP83111 547 aaPredicted RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 CEBPZQ03701 1054 aaKnown RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 NFXL1Q6ZNB6 911 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 RALYLQ86SE5 291 aaKnown RBP7.52□□□□□ -1.21
CHD6-203ENST00000373233 CYP46A1Q9Y6A2 500 aa7.52□□□□□ -1.21
CHD6-203ENST00000373233 SLC5A1P13866 664 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 ARHGAP25P42331 645 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 NEK11Q8NG66 645 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 GBP5Q96PP8 586 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 MICAL1Q8TDZ2 1067 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 PA2G4Q9UQ80 394 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 RRP15Q9Y3B9 282 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 MYH10P35580 1976 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 KIF4BQ2VIQ3 1234 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 OTUD7AQ8TE49 926 aaPredicted RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 CCDC12Q8WUD4 166 aaPredicted RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 AMOTL1Q8IY63 956 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 TUBB4AP04350 444 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 PROSER3Q2NL68 480 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 CPLX2Q6PUV4 134 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 EVI5LQ96CN4 794 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 ZSWIM4Q9H7M6 989 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 SKILP12757 684 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 SH3BGRP55822 239 aaPredicted RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 IRX5P78411 483 aaPredicted RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 ELF2Q15723 593 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 HSF2BPO75031 334 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 ANKRD1Q15327 319 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 STX1AQ16623 288 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 HDXQ7Z353 690 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 CALR3Q96L12 384 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 JAKMIP1Q96N16 626 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 UTP14AQ9BVJ6 771 aaKnown RBP7.51□□□□□ -1.21
CHD6-203ENST00000373233 RABGAP1Q9Y3P9 1069 aa7.51□□□□□ -1.21
CHD6-203ENST00000373233 LUC7L3O95232 432 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 CASTP20810 708 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 CCDC92Q53HC0 331 aaPredicted RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 CTCFLQ8NI51 663 aaPredicted RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 TAF4BQ92750 862 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 OPA1O60313 960 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 BAG4O95429 457 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 CCDC38Q502W7 563 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 HMGB2P26583 209 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 ZSCAN25Q6NSZ9 544 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms