RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 VEZTQ9HBM0 779 aa20.26■□□□□ 0.83
TRAPPC3-203ENST00000373163 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
TRAPPC3-203ENST00000373163 KIAA0100Q14667 2235 aaKnown RBP20.26■□□□□ 0.83
TRAPPC3-203ENST00000373163 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 TAF1CQ15572 869 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 MS4A4AQ96JQ5 239 aa20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
TRAPPC3-203ENST00000373163 SPDYE2BA6NHP3 402 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 SPDYE6P0CI01 402 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 CFAP100Q494V2 611 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 SH3TC2Q8TF17 1288 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 ANKRD2Q9GZV1 360 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
TRAPPC3-203ENST00000373163 F8W031 263 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 KCNJ4P48050 445 aa20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 RASA3Q14644 834 aa20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 BRI3BPQ8WY22 251 aa20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 DPF3Q92784 378 aa20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
TRAPPC3-203ENST00000373163 CCL15-CCL14A0A0B4J2E2 113 aa20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 IGKV5-2P06315 115 aa20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 CCL15Q16663 113 aa20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 AOX1Q06278 1338 aa20.21■□□□□ 0.83
TRAPPC3-203ENST00000373163 GTF2A2P52657 109 aa20.2■□□□□ 0.82
TRAPPC3-203ENST00000373163 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
TRAPPC3-203ENST00000373163 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
TRAPPC3-203ENST00000373163 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
TRAPPC3-203ENST00000373163 SZT2Q5T011 3432 aa20.2■□□□□ 0.82
TRAPPC3-203ENST00000373163 ITGA6P23229 1130 aa20.19■□□□□ 0.82
TRAPPC3-203ENST00000373163 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.82
TRAPPC3-203ENST00000373163 KIF22Q14807 665 aa20.19■□□□□ 0.82
TRAPPC3-203ENST00000373163 SHISA4Q96DD7 197 aa20.19■□□□□ 0.82
TRAPPC3-203ENST00000373163 ARHGAP39Q9C0H5 1083 aa20.19■□□□□ 0.82
TRAPPC3-203ENST00000373163 WDHD1O75717 1129 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 CHRNDQ07001 517 aa20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
TRAPPC3-203ENST00000373163 GNRH1P01148 92 aa20.17■□□□□ 0.82
TRAPPC3-203ENST00000373163 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
TRAPPC3-203ENST00000373163 VGLL4Q14135 290 aa20.17■□□□□ 0.82
TRAPPC3-203ENST00000373163 UBE3BQ7Z3V4 1068 aa20.17■□□□□ 0.82
TRAPPC3-203ENST00000373163 PRO3102Q9H379 93 aa20.17■□□□□ 0.82
TRAPPC3-203ENST00000373163 PI4KAP2A4QPH2 592 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 TLR2O60603 784 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 KSR2Q6VAB6 950 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 PI4KAP1Q8N8J0 262 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 IRS2Q9Y4H2 1338 aa20.16■□□□□ 0.82
TRAPPC3-203ENST00000373163 TRIOBPQ9H2D6 2365 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 SNAP23O00161 211 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 IL1R1P14778 569 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 PRMT2P55345 433 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 MTFR1Q15390 333 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 CCDC30Q5VVM6 783 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 HTATIP2Q9BUP3 242 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 CSADQ9Y600 493 aa20.15■□□□□ 0.82
TRAPPC3-203ENST00000373163 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 H7C1W4 665 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 SPDYE2Q495Y8 402 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 ZNF804AQ7Z570 1209 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 CDAN1Q8IWY9 1227 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC3-203ENST00000373163 TAF5LO75529 589 aa20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 RALBP1Q15311 655 aa20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 TEPSINQ96N21 525 aa20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 ZCCHC17Q9NP64 241 aaKnown RBP20.13■□□□□ 0.81
TRAPPC3-203ENST00000373163 OTOFQ9HC10 1997 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 ECM29Q5VYK3 1845 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 CETPP11597 493 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 UBE2Q1Q7Z7E8 422 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 TDRD3Q9H7E2 651 aaKnown RBP20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 NR2E3Q9Y5X4 410 aa20.12■□□□□ 0.81
TRAPPC3-203ENST00000373163 SPDYE5A6NIY4 337 aa20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 BTBD19C9JJ37 291 aa20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 ECM2O94769 699 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 GJA8P48165 433 aa20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 GNAI1P63096 354 aa20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 HELBQ8NG08 1087 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC3-203ENST00000373163 TCP10L2B9ZVM9 353 aa20.1■□□□□ 0.81
TRAPPC3-203ENST00000373163 CSF1RP07333 972 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms