RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 SOS1Q07889 1333 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 IVLP07476 585 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 ATP2A2P16615 1042 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 MXRA7P84157 204 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 AOPEPQ8N6M6 819 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 DHX58Q96C10 678 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 PARP3Q9Y6F1 533 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 PPFIA3O75145 1194 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 ANXA1P04083 346 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 IL2RBP14784 551 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 NMIQ13287 307 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 CCDC50Q8IVM0 306 aa10.65□□□□□ -0.7
SPTAN1-203ENST00000372739 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
SPTAN1-203ENST00000372739 TNNI2P48788 182 aa10.65□□□□□ -0.71
SPTAN1-203ENST00000372739 SNX21Q969T3 373 aa10.65□□□□□ -0.71
SPTAN1-203ENST00000372739 MCM9Q9NXL9 1143 aa10.65□□□□□ -0.71
SPTAN1-203ENST00000372739 GOLGA1Q92805 767 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 FLT4P35916 1363 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 LDHBP07195 334 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 UBXN1Q04323 297 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 CFAP57Q96MR6 1250 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 VEZTQ9HBM0 779 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 RIMS2Q9UQ26 1411 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 CCDC42Q96M95 316 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 SH2D4AQ9H788 454 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 NDC80O14777 642 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 PPP1R2P41236 205 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 EIF4G3O43432 1585 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 PTGS1P23219 599 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 RPL13P26373 211 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 CCDC63Q8NA47 563 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 LINS1Q8NG48 757 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 JDP2Q8WYK2 163 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 PRDM10Q9NQV6 1147 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 TXNDC16Q9P2K2 825 aa10.64□□□□□ -0.71
SPTAN1-203ENST00000372739 TRPM2O94759 1503 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 TMEM110-MUSTN1A8MSY1 372 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 POLD1P28340 1107 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 GAS8O95995 478 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 DACT1Q9NYF0 836 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 RAD50Q92878 1312 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 ZNF518AQ6AHZ1 1483 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 MCM7P33993 719 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 FRMD4BQ9Y2L6 1034 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 A2MP01023 1474 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 SMC6Q96SB8 1091 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.711e-7■■□□□ 13
SPTAN1-203ENST00000372739 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 MAK16Q9BXY0 300 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 ARID5AQ03989 594 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 CCDC6Q16204 474 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 PLCH2O75038 1416 aa10.63□□□□□ -0.71
SPTAN1-203ENST00000372739 IRS4O14654 1257 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 RBM17Q96I25 401 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 ODF2LQ9ULJ1 636 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 DNM1Q05193 864 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 CEP128Q6ZU80 1094 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 CREB3L3Q68CJ9 461 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 DHX32Q7L7V1 743 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 MTRF1LQ9UGC7 380 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 PLCB3Q01970 1234 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 IQUBQ8NA54 791 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 KIFAP3Q92845 792 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 DNAJC25Q9H1X3 360 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 GJC1P36383 396 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 SNX16P57768 344 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 DPH6Q7L8W6 267 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 MTUS1Q9ULD2 1270 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
SPTAN1-203ENST00000372739 ZBTB16Q05516 673 aa10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 TYRO3Q06418 890 aa10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 NOLC1Q14978 699 aaKnown RBP eCLIP10.61□□□□□ -0.713e-7■□□□□ 9.2
SPTAN1-203ENST00000372739 HSP90AA4PQ58FG1 418 aa10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 DENND2AQ9ULE3 1009 aa10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 EIF4A2Q14240 407 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 CCDC117Q8IWD4 279 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-203ENST00000372739 ANAPC4Q9UJX5 808 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms