RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 NPC1L1Q9UHC9 1359 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 RTN1Q16799 776 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 RBM8AQ9Y5S9 174 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 KLHL10Q6JEL2 608 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 CEP63Q96MT8 703 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 DNAJC10Q8IXB1 793 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 CNNM3Q8NE01 707 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 ZNF165P49910 485 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 TRPC5Q9UL62 973 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 BRF1Q92994 677 aa15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF1-201ENST00000372189 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 TMEM87AQ8NBN3 555 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 QTRT2Q9H974 415 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 SUPT20HQ8NEM7 779 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 NEBLO76041 1014 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 PLS1Q14651 629 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 PUM3Q15397 648 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 PCDHB15Q9Y5E8 787 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 STXBP4Q6ZWJ1 553 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 EIF6P56537 245 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 DPP8Q6V1X1 898 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-201ENST00000372189 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 NOLC1Q14978 699 aaKnown RBP eCLIP15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 CACNA2D4Q7Z3S7 1137 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 RTL9Q8NET4 1388 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 B4DLN1 442 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 CALM1P0DP23 149 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 CALM2P0DP24 149 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 CALM3P0DP25 149 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 G2E3Q7L622 706 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 ERMNQ8TAM6 284 aa15.15■□□□□ 0.02
RAPGEF1-201ENST00000372189 PTPRTO14522 1441 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 METP08581 1390 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 EYA2O00167 538 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 SMARCC2Q8TAQ2 1214 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 DBN1Q16643 649 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 UBA7P41226 1012 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 LMAN1P49257 510 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 VPS36Q86VN1 386 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 SNX21Q969T3 373 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 LARGE2Q8N3Y3 721 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 PPFIBP2Q8ND30 876 aa15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 NAA15Q9BXJ9 866 aaKnown RBP15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
RAPGEF1-201ENST00000372189 MAST3O60307 1309 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 PPFIA3O75145 1194 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 AP1ARQ63HQ0 302 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 CHL1O00533 1208 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 MYZAPP0CAP1 466 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZSCAN22P10073 491 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 CETN2P41208 172 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 NAPAP54920 295 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 PREX2Q70Z35 1606 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 TMX1Q9H3N1 280 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZBTB17Q13105 803 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 CPLX3Q8WVH0 158 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 VTI1AQ96AJ9 217 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 RRP36Q96EU6 259 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 ALS2CR12Q96Q35 445 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 PRC1O43663 620 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 PHKG2P15735 406 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 Q6ZUG5 572 aa15.13■□□□□ 0.01
RAPGEF1-201ENST00000372189 MAP3K7CLP57077 242 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 KDM5CP41229 1560 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 IDEP14735 1019 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZNF496Q96IT1 587 aaPredicted RBP15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms