RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 MYO1FO00160 1098 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 CTDNEP1O95476 244 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 SERPINC1P01008 464 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 CCT2P78371 535 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 GGT6Q6P531 493 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 SAMD1Q6SPF0 538 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 EGFL6Q8IUX8 553 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 CRB1P82279 1406 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 A1BGP04217 495 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 Q6ZUG5 572 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 SGSM3Q96HU1 749 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 MED4Q9NPJ6 270 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 GJB4Q9NTQ9 266 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
HMGCLL1-204ENST00000370852 SATB1Q01826 763 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 EIF4A2Q14240 407 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 RNF217Q8TC41 542 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 POLD4Q9HCU8 107 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 SOWAHDA6NJG2 315 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 POLA2Q14181 598 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 ZRSR1Q15695 479 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 VSTM4Q8IW00 320 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 BAG1Q99933 345 aaPredicted RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-204ENST00000370852 ABCA9Q8IUA7 1624 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 A0A0G2JLW4 131 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 ZSCAN12O43309 604 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 ZMYND10O75800 440 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 TUBB4AP04350 444 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 TOP1P11387 765 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 CCDC129Q6ZRS4 1044 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 MRPS27Q92552 414 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 KAT14Q9H8E8 782 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 IRF6O14896 467 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 NRDCO43847 1150 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 PRPF6O94906 941 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 PAX7P23759 505 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 PDE6BP35913 854 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 USP5P45974 858 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 NLRP12P59046 1061 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 RPAINQ86UA6 219 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 ERC1Q8IUD2 1116 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 TC2NQ8N9U0 490 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 HNRNPLLQ8WVV9 542 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 STK31Q9BXU1 1019 aa10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
HMGCLL1-204ENST00000370852 COL15A1P39059 1388 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 GLRX3O76003 335 aaKnown RBP10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 SLC3A2P08195 630 aaKnown RBP10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 PSMA5P28066 241 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 CDC27P30260 824 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 PDE4BQ07343 736 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 FAM71BQ8TC56 605 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 NPATQ14207 1427 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 FRMD3A2A2Y4 597 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 ARHGAP6O43182 974 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 CCP110O43303 1012 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 MAP9Q49MG5 647 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 CHST3Q7LGC8 479 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 XRN1Q8IZH2 1706 aaKnown RBP10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 MSANTD4Q8NCY6 345 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 NSUN7Q8NE18 718 aaKnown RBP10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 AFAP1L1Q8TED9 768 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 CDC5LQ99459 802 aaKnown RBP10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 BOLA2Q9H3K6 86 aa10.82□□□□□ -0.68
HMGCLL1-204ENST00000370852 RIMS1Q86UR5 1692 aaKnown RBP10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 PTPRMP28827 1452 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 PTPDC1A2A3K4 754 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 ZNF202O95125 648 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 ANXA1P04083 346 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 PNOCQ13519 176 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 MTHFSDQ2M296 383 aaKnown RBP10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 NCAPH2Q6IBW4 605 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 ATP7AQ04656 1500 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 MROH7-TTC4A0A0A0MT08 1334 aa10.81□□□□□ -0.68
HMGCLL1-204ENST00000370852 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms