RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SELENOOQ9BVL4 669 aa18.07■□□□□ 0.48
COL17A1-202ENST00000369733 MACROD2A1Z1Q3 448 aa18.07■□□□□ 0.48
COL17A1-202ENST00000369733 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
COL17A1-202ENST00000369733 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
COL17A1-202ENST00000369733 WDHD1O75717 1129 aaPredicted RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 OAS2P29728 719 aaKnown RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 ATP2B3Q16720 1220 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 CCDC129Q6ZRS4 1044 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 LUC7L2Q9Y383 392 aaKnown RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 ESR2Q92731 530 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 NAPGQ99747 312 aaPredicted RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 NSRP1Q9H0G5 558 aaKnown RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 BICC1Q9H694 974 aaKnown RBP18.06■□□□□ 0.48
COL17A1-202ENST00000369733 MMRN2Q9H8L6 949 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 SLC4A4Q9Y6R1 1079 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
COL17A1-202ENST00000369733 VAV2P52735 878 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 ANO1Q5XXA6 986 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 MAP3K5Q99683 1374 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 RXRAP19793 462 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 TUBB2AQ13885 445 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 CCDC122Q5T0U0 273 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 SPAG5Q96R06 1193 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 TUBB2BQ9BVA1 445 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 VAT1LQ9HCJ6 419 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 NLRP12P59046 1061 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 ZNF652Q9Y2D9 606 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 ASIC1P78348 528 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 IFT81Q8WYA0 676 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 ABCC4O15439 1325 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 IL13P35225 146 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 LRMPQ12912 555 aa18.05■□□□□ 0.48
COL17A1-202ENST00000369733 FLT4P35916 1363 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 SLC39A6Q13433 755 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 ANKS4BQ8N8V4 417 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 CCDC114Q96M63 670 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
COL17A1-202ENST00000369733 NCOA5Q9HCD5 579 aaKnown RBP18.04■□□□□ 0.48
COL17A1-202ENST00000369733 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 KRT2P35908 639 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 CCT6AP40227 531 aaKnown RBP18.03■□□□□ 0.48
COL17A1-202ENST00000369733 DMTNQ08495 405 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 CETN1Q12798 172 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
COL17A1-202ENST00000369733 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 CHL1O00533 1208 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 CD2BP2O95400 341 aaKnown RBP18.03■□□□□ 0.48
COL17A1-202ENST00000369733 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 ARFGAP2Q8N6H7 521 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
COL17A1-202ENST00000369733 KCNH3Q9ULD8 1083 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 CFAP58Q5T655 872 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 PYCARDQ9ULZ3 195 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 ABCC2Q92887 1545 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 ZNF202O95125 648 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 GBP6Q6ZN66 633 aa18.02■□□□□ 0.48
COL17A1-202ENST00000369733 ME3Q16798 604 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 HOOK3Q86VS8 718 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 SCLT1Q96NL6 688 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 EYA1Q99502 592 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 ZNF215Q9UL58 517 aaPredicted RBP18.02■□□□□ 0.47
COL17A1-202ENST00000369733 SLC4A8Q2Y0W8 1093 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 SSH2Q76I76 1423 aa18.02■□□□□ 0.47
COL17A1-202ENST00000369733 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 JAK2O60674 1132 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 KIF4AO95239 1232 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 VGLL3A8MV65 326 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
COL17A1-202ENST00000369733 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 TSGA10Q9BZW7 698 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 XPO4Q9C0E2 1151 aaKnown RBP18.01■□□□□ 0.47
COL17A1-202ENST00000369733 CYP7A1P22680 504 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 TNIP1Q15025 636 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 IQUBQ8NA54 791 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 CTNND2Q9UQB3 1225 aa18.01■□□□□ 0.47
COL17A1-202ENST00000369733 DESP17661 470 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 NAA16Q6N069 864 aaPredicted RBP18■□□□□ 0.47
COL17A1-202ENST00000369733 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 RASAL2Q9UJF2 1139 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
COL17A1-202ENST00000369733 ARID5AQ03989 594 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 CYP26C1Q6V0L0 522 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 ZNF521Q96K83 1311 aa18■□□□□ 0.47
COL17A1-202ENST00000369733 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
COL17A1-202ENST00000369733 PTPRTO14522 1441 aa17.99■□□□□ 0.47
COL17A1-202ENST00000369733 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
COL17A1-202ENST00000369733 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms