RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TTC14Q96N46 770 aa16.93■□□□□ 0.3
HMGCS2-201ENST00000369406 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
HMGCS2-201ENST00000369406 SRGNP10124 158 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 DDIT3P35638 169 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 KCNJ4P48050 445 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 APPBP2Q92624 585 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 BAG6P46379 1132 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 ADGRA1Q86SQ6 560 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 ZNF384Q8TF68 577 aa16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 JAKMIP1Q96N16 626 aaKnown RBP16.92■□□□□ 0.3
HMGCS2-201ENST00000369406 CCDC88AQ3V6T2 1871 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 CYP21A2P08686 494 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
HMGCS2-201ENST00000369406 GPAA1O43292 621 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 XDHP47989 1333 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 ST18O60284 1047 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
HMGCS2-201ENST00000369406 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-201ENST00000369406 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 AK2P54819 239 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 RUFY3Q7L099 469 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 UFL1O94874 794 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
HMGCS2-201ENST00000369406 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 BBOX1O75936 387 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 LARGE1O95461 756 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 CHRNA5P30532 468 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 LEMD3Q9Y2U8 911 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 DTNBO60941 627 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 GRIK5Q16478 980 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 TSGA10IPQ3SY00 556 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 GNL3LQ9NVN8 582 aaKnown RBP16.87■□□□□ 0.29
HMGCS2-201ENST00000369406 NPR1P16066 1061 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 MAP3K12Q12852 859 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 PRKAB2O43741 272 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 MBD4O95243 580 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 FGAP02671 866 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 LCORLQ8N3X6 602 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
HMGCS2-201ENST00000369406 PDE6BP35913 854 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 HAND2P61296 217 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 MYH2Q9UKX2 1941 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 CDK5RAP2Q96SN8 1893 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 PRDX5P30044 214 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 SP8Q8IXZ3 490 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
HMGCS2-201ENST00000369406 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 C15orf52Q6ZUT6 534 aaKnown RBP16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 ST3GAL1Q11201 340 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 ZNF622Q969S3 477 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms