RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 C19orf57Q0VDD7 668 aa7.04□□□□□ -1.28
ECHDC1-201ENST00000368287 C16orf46Q6P387 395 aa7.04□□□□□ -1.28
ECHDC1-201ENST00000368287 PPP1R12CQ9BZL4 782 aa7.04□□□□□ -1.28
ECHDC1-201ENST00000368287 FARP2O94887 1054 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 TIAF1O95411 115 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 ADMP35318 185 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 ZAR1Q86SH2 424 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 FAM200AQ8TCP9 573 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 TMPRSS13Q9BYE2 586 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 SAP130Q9H0E3 1048 aa7.03□□□□□ -1.28
ECHDC1-201ENST00000368287 FAM26DQ5JW98 314 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 YIPF2Q9BWQ6 316 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 USP26Q9BXU7 913 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 SUGCTQ9HAC7 445 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 KANSL3Q9P2N6 904 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 PRKAG2Q9UGJ0 569 aa7.02□□□□□ -1.29
ECHDC1-201ENST00000368287 FAM170BA6NMN3 283 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 ZAP70P43403 619 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 PLCL1Q15111 1095 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 GPR152Q8TDT2 470 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 LRRC4CQ9HCJ2 640 aa7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-201ENST00000368287 LMOD1P29536 600 aaPredicted RBP7□□□□□ -1.29
ECHDC1-201ENST00000368287 HGSNATQ68CP4 663 aa7□□□□□ -1.29
ECHDC1-201ENST00000368287 KSR1Q8IVT5 923 aa7□□□□□ -1.29
ECHDC1-201ENST00000368287 PRIMPOLQ96LW4 560 aa7□□□□□ -1.29
ECHDC1-201ENST00000368287 ZC3H7BQ9UGR2 993 aaKnown RBP7□□□□□ -1.29
ECHDC1-201ENST00000368287 CARMIL2Q6F5E8 1435 aa7□□□□□ -1.29
ECHDC1-201ENST00000368287 PDE2AO00408 941 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 DRD2P14416 443 aa6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 ACPPP15309 386 aa6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 ZNF792Q3KQV3 632 aa6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 SLC5A6Q9Y289 635 aa6.99□□□□□ -1.29
ECHDC1-201ENST00000368287 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
ECHDC1-201ENST00000368287 TNFRSF10BO14763 440 aa6.98□□□□□ -1.29
ECHDC1-201ENST00000368287 CCER1Q8TC90 406 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-201ENST00000368287 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
ECHDC1-201ENST00000368287 TMEM63CQ9P1W3 806 aa6.98□□□□□ -1.29
ECHDC1-201ENST00000368287 NFKBIEO00221 500 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 PRMT3O60678 531 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 CYP27A1Q02318 531 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 IKBKEQ14164 716 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 PDE12Q6L8Q7 609 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 C2CD4AQ8NCU7 369 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 BCL7CQ8WUZ0 217 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 EZH1Q92800 747 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 CALR3Q96L12 384 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 SLC38A3Q99624 504 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 DZANK1Q9NVP4 752 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
ECHDC1-201ENST00000368287 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 SUPT5HO00267 1087 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 SOX1O00570 391 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 EXOSC6Q5RKV6 272 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 ZNF574Q6ZN55 896 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 FAM168AQ92567 244 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 GATA6Q92908 595 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 HHIPQ96QV1 700 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
ECHDC1-201ENST00000368287 TRPA1O75762 1119 aa6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 DLGAP3O95886 979 aa6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 CES1P23141 567 aa6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 SOX4Q06945 474 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 ATG4DQ86TL0 474 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-201ENST00000368287 MAP7Q14244 749 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 SWI5Q1ZZU3 235 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 PROSER2Q86WR7 435 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 ABTB2Q8N961 1025 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 BSNDQ8WZ55 320 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
ECHDC1-201ENST00000368287 RAB6AP20340 208 aa6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 RFX1P22670 979 aa6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 NAA30Q147X3 362 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 VN1R5Q7Z5H4 357 aa6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 TMEM40Q8WWA1 233 aa6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 NUDT16Q96DE0 195 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 RC3H2Q9HBD1 1191 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 STIM2Q9P246 746 aa6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-201ENST00000368287 ZBTB39O15060 712 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 NFICP08651 508 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 ADH5P11766 374 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 OCLNQ16625 522 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 C1orf127Q8N9H9 656 aa6.92□□□□□ -1.3
ECHDC1-201ENST00000368287 ZNF865P0CJ78 1059 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms