RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 MCM3P25205 808 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 AMPD3Q01432 767 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 MYRIPQ8NFW9 859 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 RSPH14Q9UHP6 348 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 SLC27A2O14975 620 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 HLA-DOAP06340 250 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 RPS6KB1P23443 525 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 TSPY3P0CV98 308 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 TSPY8P0CW00 308 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 CCDC129Q6ZRS4 1044 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 CUL5Q93034 780 aa15.15■□□□□ 0.02
PTPRK-204ENST00000368210 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-204ENST00000368210 GIGYF1O75420 1035 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-204ENST00000368210 TYRO3Q06418 890 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 MICALL1Q8N3F8 863 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 LIG1P18858 919 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 TNIP1Q15025 636 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 SSH3Q8TE77 659 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 ZNF830Q96NB3 372 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-204ENST00000368210 C8orf37Q96NL8 207 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 UBAP1LF5GYI3 381 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 YEATS4O95619 227 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 EZRP15311 586 aaKnown RBP15.14■□□□□ 0.01
PTPRK-204ENST00000368210 GNAQP50148 359 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 CCDC178Q5BJE1 867 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 KCNQ3O43525 872 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
PTPRK-204ENST00000368210 TAF4BQ92750 862 aa15.14■□□□□ 0.01
PTPRK-204ENST00000368210 A0A1B0GUA9 196 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 GSPT1P15170 499 aaKnown RBP15.13■□□□□ 0.01
PTPRK-204ENST00000368210 ITGA6P23229 1130 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 CCDC186Q7Z3E2 898 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 UBA5Q9GZZ9 404 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 SH3TC1Q8TE82 1336 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 CASQ1P31415 396 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 SETSIPP0DME0 302 aa15.13■□□□□ 0.01
PTPRK-204ENST00000368210 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
PTPRK-204ENST00000368210 ZNF594Q96JF6 807 aaPredicted RBP15.13■□□□□ 0.01
PTPRK-204ENST00000368210 UBASH3AP57075 661 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
PTPRK-204ENST00000368210 TRIM75PA6NK02 468 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 TMCO5BA8MYB1 307 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 DRC1Q96MC2 740 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 ATP7BP35670 1465 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 AFMP43652 599 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 WWC2Q6AWC2 1192 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 BRAPQ7Z569 592 aa15.12■□□□□ 0.01
PTPRK-204ENST00000368210 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
PTPRK-204ENST00000368210 AOPEPQ8N6M6 819 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
PTPRK-204ENST00000368210 HSPA4P34932 840 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
PTPRK-204ENST00000368210 XAGE2Q96GT9 111 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 ZCCHC11Q5TAX3 1644 aaKnown RBP15.11■□□□□ 0.01
PTPRK-204ENST00000368210 N4BP3O15049 544 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 CALM1P0DP23 149 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 CALM2P0DP24 149 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 CALM3P0DP25 149 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 MBD4O95243 580 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 CAPN2P17655 700 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 RXRAP19793 462 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 APPBP2Q92624 585 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 CABP5Q9NP86 173 aa15.11■□□□□ 0.01
PTPRK-204ENST00000368210 NEURL1BA8MQ27 555 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 MAP2K2P36507 400 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
PTPRK-204ENST00000368210 ARFGAP3Q9NP61 516 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 GOLGA6L9A6NEM1 432 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 SKILP12757 684 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
PTPRK-204ENST00000368210 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
PTPRK-204ENST00000368210 PDE8AO60658 829 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
PTPRK-204ENST00000368210 ATL3Q6DD88 541 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 ZNF804AQ7Z570 1209 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
PTPRK-204ENST00000368210 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 USO1O60763 962 aaKnown RBP15.09■□□□□ 0.01
PTPRK-204ENST00000368210 PUM3Q15397 648 aaKnown RBP15.09■□□□□ 0.01
PTPRK-204ENST00000368210 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
PTPRK-204ENST00000368210 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 CLASP1Q7Z460 1538 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 KIF1BO60333 1816 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 HSP90AA4PQ58FG1 418 aa15.09■□□□□ 0.01
PTPRK-204ENST00000368210 LRCH2Q5VUJ6 765 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms