RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
VTA1-201ENST00000367621 SNAP23O00161 211 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 HRO43593 1189 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 CHMLP26374 656 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 HOXA10P31260 410 aaPredicted RBP11.58□□□□□ -0.56
VTA1-201ENST00000367621 FOXK1P85037 733 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 CHRNDQ07001 517 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 NBR1Q14596 966 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 SLC51AQ86UW1 340 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 NEUROD6Q96NK8 337 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 MPHOSPH8Q99549 860 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 MINPP1Q9UNW1 487 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 TNRC6CQ9HCJ0 1690 aaKnown RBP11.58□□□□□ -0.56
VTA1-201ENST00000367621 TUBGCP6Q96RT7 1819 aa11.58□□□□□ -0.56
VTA1-201ENST00000367621 TAF5LO75529 589 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 ST5P78524 1137 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
VTA1-201ENST00000367621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
VTA1-201ENST00000367621 LPIN2Q92539 896 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 RILPL2Q969X0 211 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 HAUS7Q99871 368 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 IL25Q9H293 177 aa11.57□□□□□ -0.56
VTA1-201ENST00000367621 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
VTA1-201ENST00000367621 GRAPQ13588 217 aa11.56□□□□□ -0.56
VTA1-201ENST00000367621 DDX46Q7L014 1031 aaKnown RBP11.56□□□□□ -0.56
VTA1-201ENST00000367621 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
VTA1-201ENST00000367621 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
VTA1-201ENST00000367621 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
VTA1-201ENST00000367621 ZNF512BQ96KM6 892 aaPredicted RBP11.56□□□□□ -0.56
VTA1-201ENST00000367621 NDUFB9Q9Y6M9 179 aa11.56□□□□□ -0.56
VTA1-201ENST00000367621 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
VTA1-201ENST00000367621 SCARF1Q14162 830 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 CNTROBQ8N137 903 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 PARP3Q9Y6F1 533 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 NRXN2Q9P2S2 1712 aa11.55□□□□□ -0.56
VTA1-201ENST00000367621 NPHP1O15259 732 aa11.54□□□□□ -0.56
VTA1-201ENST00000367621 PHKA1P46020 1223 aa11.54□□□□□ -0.56
VTA1-201ENST00000367621 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
VTA1-201ENST00000367621 ESYT1Q9BSJ8 1104 aa11.54□□□□□ -0.56
VTA1-201ENST00000367621 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
VTA1-201ENST00000367621 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
VTA1-201ENST00000367621 MYH3P11055 1940 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
VTA1-201ENST00000367621 SRGNP10124 158 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 SLC5A1P13866 664 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 ARID4AP29374 1257 aaPredicted RBP11.53□□□□□ -0.56
VTA1-201ENST00000367621 MCAMP43121 646 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 UBE4AQ14139 1066 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 CCDC158Q5M9N0 1113 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 CCDC102BQ68D86 513 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 RBM17Q96I25 401 aaKnown RBP11.53□□□□□ -0.56
VTA1-201ENST00000367621 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
VTA1-201ENST00000367621 SGSM2O43147 1006 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 CHGBP05060 677 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 KLRK1P26718 216 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
VTA1-201ENST00000367621 BCAMP50895 628 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 TTC39AQ5SRH9 613 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 RPGRQ92834 1020 aaKnown RBP11.52□□□□□ -0.57
VTA1-201ENST00000367621 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
VTA1-201ENST00000367621 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 SNRKQ9NRH2 765 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.57
VTA1-201ENST00000367621 GOLIM4O00461 696 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 BBOX1O75936 387 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 NPR1P16066 1061 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 PDE6BP35913 854 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 ZAP70P43403 619 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 GORABQ5T7V8 394 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
VTA1-201ENST00000367621 FAM227BQ96M60 508 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 KIF2CQ99661 725 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 HMG20BQ9P0W2 317 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 QSER1Q2KHR3 1735 aa11.51□□□□□ -0.57
VTA1-201ENST00000367621 TBC1D12O60347 775 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
VTA1-201ENST00000367621 PSEN2P49810 448 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 GPSM2P81274 684 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
VTA1-201ENST00000367621 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms