RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 SPA17Q15506 151 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 CD2BP2O95400 341 aaKnown RBP11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 DZIP1Q86YF9 867 aaKnown RBP11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 ESR2Q92731 530 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 SNW1Q13573 536 aaKnown RBP11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 RTN1Q16799 776 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 UTP14AQ9BVJ6 771 aaKnown RBP11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 KCNQ3O43525 872 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 PDE4BQ07343 736 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 ARHGEF25Q86VW2 580 aa11.16□□□□□ -0.62
CACNA1S-202ENST00000367338 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 IRS4O14654 1257 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 BICDL1Q6ZP65 573 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 NLRP5P59047 1200 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 APPBP2Q92624 585 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 ZNF830Q96NB3 372 aaPredicted RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 MKNK2Q9HBH9 465 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 MYOM1P52179 1685 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 CALM1P0DP23 149 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 CALM2P0DP24 149 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 CALM3P0DP25 149 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 GPT2Q8TD30 523 aa11.15□□□□□ -0.62
CACNA1S-202ENST00000367338 KIF5CO60282 957 aa11.15□□□□□ -0.63
CACNA1S-202ENST00000367338 ME3Q16798 604 aa11.15□□□□□ -0.63
CACNA1S-202ENST00000367338 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.63
CACNA1S-202ENST00000367338 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.63
CACNA1S-202ENST00000367338 TMEM87BQ96K49 555 aa11.15□□□□□ -0.63
CACNA1S-202ENST00000367338 BIN1O00499 593 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 SKIDA1Q1XH10 827 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 TMCO3Q6UWJ1 677 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 LEO1Q8WVC0 666 aaPredicted RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 COPRSQ9NQ92 184 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 AOPEPQ8N6M6 819 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 PTH1RQ03431 593 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 FAM107BQ9H098 131 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 TTC12Q9H892 705 aaPredicted RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 LDHCP07864 332 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 SKILP12757 684 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 ZNF444Q8N0Y2 327 aaPredicted RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 EAF2Q96CJ1 260 aaPredicted RBP11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 CTAGE1Q96RT6 745 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 HAUS7Q99871 368 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
CACNA1S-202ENST00000367338 CCDC129Q6ZRS4 1044 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 KLHDC4Q8TBB5 520 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 PTPRUQ92729 1446 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 SSBP05455 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 GSTO1P78417 241 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 TICAM2Q86XR7 235 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 PIBF1Q8WXW3 757 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 ADGRB2O60241 1585 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CYP7A1P22680 504 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 UBASH3AP57075 661 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 ELP1O95163 1332 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 CRB1P82279 1406 aa11.13□□□□□ -0.63
CACNA1S-202ENST00000367338 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 GOLGA6L10A0A0M3HER8 536 aa11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 MATR3P43243 847 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 PKP1Q13835 747 aa11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 TRMT1Q9NXH9 659 aaKnown RBP11.12□□□□□ -0.63
CACNA1S-202ENST00000367338 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms