RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 DNAJC5Q9H3Z4 198 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 ZSWIM4Q9H7M6 989 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 CARMIL3Q8ND23 1372 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 TRDNQ13061 729 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 SYCP1Q15431 976 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 IMMTQ16891 758 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 TTC39AQ5SRH9 613 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 PRC1O43663 620 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 DHX16O60231 1041 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 TATP17735 454 aaPredicted RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 TERF2Q15554 542 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 USPL1Q5W0Q7 1092 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 NWD1Q149M9 1564 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 TOP1P11387 765 aaKnown RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 SYKP43405 635 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 FANCCQ00597 558 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 SPECC1Q5M775 1068 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 TEX35Q5T0J7 233 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 E4F1Q66K89 784 aaPredicted RBP9.48□□□□□ -0.89
CD46-208ENST00000367042 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 MICU3Q86XE3 530 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 KCNG4Q8TDN1 519 aa9.48□□□□□ -0.89
CD46-208ENST00000367042 CABP4P57796 275 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 PDIA6Q15084 440 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 ARMCX5Q6P1M9 558 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 ALDH8A1Q9H2A2 487 aaPredicted RBP9.47□□□□□ -0.89
CD46-208ENST00000367042 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
CD46-208ENST00000367042 CACNA1FO60840 1977 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
CD46-208ENST00000367042 TRIM29Q14134 588 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 CCDC158Q5M9N0 1113 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 FMR1NBQ8N0W7 255 aaPredicted RBP9.47□□□□□ -0.89
CD46-208ENST00000367042 LINC00301Q8NCQ3 95 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 CCDC34Q96HJ3 373 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 AIFM3Q96NN9 605 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 CARD6Q9BX69 1037 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 EPC1Q9H2F5 836 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 ADGRL3Q9HAR2 1447 aa9.47□□□□□ -0.89
CD46-208ENST00000367042 A0A1B0GUL7 405 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 RNF113AO15541 343 aaKnown RBP9.46□□□□□ -0.89
CD46-208ENST00000367042 SLFN14P0C7P3 912 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 PFKFB1P16118 471 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 MAST3O60307 1309 aa9.46□□□□□ -0.89
CD46-208ENST00000367042 PXDNQ92626 1479 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 ZNF213O14771 459 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 CLCN6P51797 869 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 GNG11P61952 73 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 PNOCQ13519 176 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 CHRNA2Q15822 529 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
CD46-208ENST00000367042 CHMP4CQ96CF2 233 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 SLC52A2Q9HAB3 445 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.46□□□□□ -0.91e-6■■■□□ 14.7
CD46-208ENST00000367042 M0R2C6 588 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 SEC31AO94979 1220 aaKnown RBP9.46□□□□□ -0.9
CD46-208ENST00000367042 ANO1Q5XXA6 986 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 PHKBQ93100 1093 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 HELLSQ9NRZ9 838 aa9.46□□□□□ -0.9
CD46-208ENST00000367042 CCDC57Q2TAC2 916 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 CPLX2Q6PUV4 134 aaKnown RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 ILDR1Q86SU0 546 aaPredicted RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 CLIC6Q96NY7 704 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 ALG1Q9BT22 464 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 PUS3Q9BZE2 481 aaKnown RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 RTEL1Q9NZ71 1219 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 IMPACTQ9P2X3 320 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 NLRP12P59046 1061 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 RRP12Q5JTH9 1297 aaKnown RBP9.45□□□□□ -0.9
CD46-208ENST00000367042 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 PI16Q6UXB8 463 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 OSBP2Q969R2 916 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
CD46-208ENST00000367042 VGLL3A8MV65 326 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 IDH1O75874 414 aaKnown RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 KARSQ15046 597 aaKnown RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 ATL3Q6DD88 541 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms