RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 TSNAXIP1Q2TAA8 658 aa11.62□□□□□ -0.55
ATF3-206ENST00000366987 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
ATF3-206ENST00000366987 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
ATF3-206ENST00000366987 SMCR8Q8TEV9 937 aaPredicted RBP11.62□□□□□ -0.55
ATF3-206ENST00000366987 UBXN4Q92575 508 aa11.62□□□□□ -0.55
ATF3-206ENST00000366987 EZH1Q92800 747 aaPredicted RBP11.62□□□□□ -0.55
ATF3-206ENST00000366987 KAT2BQ92831 832 aa11.62□□□□□ -0.55
ATF3-206ENST00000366987 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
ATF3-206ENST00000366987 ORC3Q9UBD5 711 aaPredicted RBP11.62□□□□□ -0.55
ATF3-206ENST00000366987 USP31Q70CQ4 1352 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
ATF3-206ENST00000366987 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 SASH1O94885 1247 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 CEP112Q8N8E3 955 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 TMEM87AQ8NBN3 555 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 FAM81AQ8TBF8 368 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 IRX2Q9BZI1 471 aaPredicted RBP11.61□□□□□ -0.55
ATF3-206ENST00000366987 MARF1Q9Y4F3 1742 aaKnown RBP11.61□□□□□ -0.55
ATF3-206ENST00000366987 SPATA31A3Q5VYP0 1347 aa11.61□□□□□ -0.55
ATF3-206ENST00000366987 ERC2O15083 957 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 VCAM1P19320 739 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 SLMAPQ14BN4 828 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 MFSD4BQ5TF39 518 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 GET4Q7L5D6 327 aaPredicted RBP11.6□□□□□ -0.55
ATF3-206ENST00000366987 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 NECTIN2Q92692 538 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
ATF3-206ENST00000366987 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 ATP6V0A4Q9HBG4 840 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 FYB1O15117 783 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 MX1P20591 662 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
ATF3-206ENST00000366987 CCDC181Q5TID7 509 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 APLFQ8IW19 511 aaPredicted RBP11.6□□□□□ -0.55
ATF3-206ENST00000366987 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
ATF3-206ENST00000366987 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
ATF3-206ENST00000366987 COL22A1Q8NFW1 1626 aaPredicted RBP11.59□□□□□ -0.55
ATF3-206ENST00000366987 EME2A4GXA9 379 aaPredicted RBP11.59□□□□□ -0.55
ATF3-206ENST00000366987 EZRP15311 586 aaKnown RBP11.59□□□□□ -0.55
ATF3-206ENST00000366987 PTGS1P23219 599 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 SESN3P58005 492 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 LAMB3Q13751 1172 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 CC2D1AQ6P1N0 951 aaPredicted RBP11.59□□□□□ -0.55
ATF3-206ENST00000366987 MICALCLQ6ZW33 695 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 NME9Q86XW9 330 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 CCDC170Q8IYT3 715 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 OR8K1Q8NGG5 319 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 COG3Q96JB2 828 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 UNC45AQ9H3U1 944 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 KIF9Q9HAQ2 790 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 12.9
ATF3-206ENST00000366987 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 CRYBG1Q9Y4K1 1723 aa11.59□□□□□ -0.55
ATF3-206ENST00000366987 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 KIF5CO60282 957 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 VDRP11473 427 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 IFT88Q13099 833 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.55
ATF3-206ENST00000366987 PLCB4Q15147 1175 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.55
ATF3-206ENST00000366987 CACTIN-AS1Q8N1I8 211 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 GPR161Q8N6U8 529 aaKnown RBP11.58□□□□□ -0.55
ATF3-206ENST00000366987 TBC1D5Q92609 795 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.55
ATF3-206ENST00000366987 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
ATF3-206ENST00000366987 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 ABCA3Q99758 1704 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 FAM200BP0CF97 657 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 YY1P25490 414 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 KCNJ6P48051 423 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 GJA8P48165 433 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
ATF3-206ENST00000366987 CCDC15Q0P6D6 951 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 XAGE2Q96GT9 111 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 RBM17Q96I25 401 aaKnown RBP11.58□□□□□ -0.56
ATF3-206ENST00000366987 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 GGNBP2Q9H3C7 697 aa11.58□□□□□ -0.56
ATF3-206ENST00000366987 SLIT3O75094 1523 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 MAP2K7O14733 419 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 LIN7AO14910 233 aaPredicted RBP11.57□□□□□ -0.56
ATF3-206ENST00000366987 E2F6O75461 281 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 FSBPO95073 299 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 MYL1P05976 194 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 PYGBP11216 843 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 INPP5BP32019 993 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 NLRP6P59044 892 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 TUBB4BP68371 445 aa11.57□□□□□ -0.56
ATF3-206ENST00000366987 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms