RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 NUDT8Q8WV74 236 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 SLC6A14Q9UN76 642 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 RTEL1-TNFRSF6BF6WH68 1400 aa11.61□□□□□ -0.55
H3F3A-201ENST00000366813 NFKB1P19838 968 aa11.61□□□□□ -0.55
H3F3A-201ENST00000366813 IDH3AP50213 366 aa11.61□□□□□ -0.55
H3F3A-201ENST00000366813 COL9A3Q14050 684 aaPredicted RBP11.61□□□□□ -0.55
H3F3A-201ENST00000366813 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
H3F3A-201ENST00000366813 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
H3F3A-201ENST00000366813 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
H3F3A-201ENST00000366813 DNAJB12Q9NXW2 375 aaKnown RBP11.61□□□□□ -0.55
H3F3A-201ENST00000366813 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
H3F3A-201ENST00000366813 NID1P14543 1247 aa11.6□□□□□ -0.55
H3F3A-201ENST00000366813 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
H3F3A-201ENST00000366813 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
H3F3A-201ENST00000366813 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-201ENST00000366813 DEFB132Q7Z7B7 95 aa11.6□□□□□ -0.55
H3F3A-201ENST00000366813 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
H3F3A-201ENST00000366813 CCNB3Q8WWL7 1395 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 LRP5O75197 1615 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
H3F3A-201ENST00000366813 MICAL2O94851 1124 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 INPP5BP32019 993 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 ARSDP51689 593 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 PCSK7Q16549 785 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 KRT25Q7Z3Z0 450 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
H3F3A-201ENST00000366813 NOVA2Q9UNW9 492 aaKnown RBP11.59□□□□□ -0.55
H3F3A-201ENST00000366813 DIP2AQ14689 1571 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
H3F3A-201ENST00000366813 ABCC3O15438 1527 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 RGS9O75916 674 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-201ENST00000366813 GRIK4Q16099 956 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 PSAPL1Q6NUJ1 521 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 BRINP3Q76B58 766 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 SEMA6BQ9H3T3 888 aa11.58□□□□□ -0.56
H3F3A-201ENST00000366813 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
H3F3A-201ENST00000366813 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
H3F3A-201ENST00000366813 TET3O43151 1660 aa11.57□□□□□ -0.56
H3F3A-201ENST00000366813 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
H3F3A-201ENST00000366813 RAC1P63000 192 aa11.56□□□□□ -0.56
H3F3A-201ENST00000366813 FAM35AQ86V20 835 aa11.56□□□□□ -0.56
H3F3A-201ENST00000366813 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
H3F3A-201ENST00000366813 USP21Q9UK80 565 aa11.56□□□□□ -0.56
H3F3A-201ENST00000366813 NWD1Q149M9 1564 aa11.55□□□□□ -0.56
H3F3A-201ENST00000366813 ATF3P18847 181 aa11.55□□□□□ -0.56
H3F3A-201ENST00000366813 MYO19Q96H55 970 aa11.55□□□□□ -0.56
H3F3A-201ENST00000366813 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
H3F3A-201ENST00000366813 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-201ENST00000366813 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
H3F3A-201ENST00000366813 SASH3O75995 380 aa11.54□□□□□ -0.56
H3F3A-201ENST00000366813 CPB1P15086 417 aa11.54□□□□□ -0.56
H3F3A-201ENST00000366813 TARSP26639 723 aaKnown RBP11.54□□□□□ -0.56
H3F3A-201ENST00000366813 C11orf16Q9NQ32 467 aa11.54□□□□□ -0.56
H3F3A-201ENST00000366813 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
H3F3A-201ENST00000366813 MAST1Q9Y2H9 1570 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 A0A0A0MRY4 1105 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 C9orf172C9J069 976 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 MAP3K6O95382 1288 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 RARAP10276 462 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 ARID4AP29374 1257 aaPredicted RBP11.53□□□□□ -0.56
H3F3A-201ENST00000366813 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
H3F3A-201ENST00000366813 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
H3F3A-201ENST00000366813 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
H3F3A-201ENST00000366813 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.57
H3F3A-201ENST00000366813 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
H3F3A-201ENST00000366813 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
H3F3A-201ENST00000366813 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
H3F3A-201ENST00000366813 RTCBQ9Y3I0 505 aaKnown RBP11.52□□□□□ -0.57
H3F3A-201ENST00000366813 EEA1Q15075 1411 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 PRMT3O60678 531 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 GRNP28799 593 aaKnown RBP11.51□□□□□ -0.57
H3F3A-201ENST00000366813 SWI5Q1ZZU3 235 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 ELMSAN1Q6PJG2 1045 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 CMTR1Q8N1G2 835 aaKnown RBP11.51□□□□□ -0.57
H3F3A-201ENST00000366813 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 ZFATQ9P243 1243 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 LRFN2Q9ULH4 789 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 USTQ9Y2C2 406 aa11.51□□□□□ -0.57
H3F3A-201ENST00000366813 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-201ENST00000366813 ELNP15502 786 aa11.5□□□□□ -0.57
H3F3A-201ENST00000366813 IDI1Q13907 227 aa11.5□□□□□ -0.57
H3F3A-201ENST00000366813 TREML1Q86YW5 311 aa11.5□□□□□ -0.57
H3F3A-201ENST00000366813 NAGPAQ9UK23 515 aa11.5□□□□□ -0.57
H3F3A-201ENST00000366813 PIK3C2BO00750 1634 aa11.5□□□□□ -0.57
H3F3A-201ENST00000366813 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 OPLAHO14841 1288 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
H3F3A-201ENST00000366813 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-201ENST00000366813 FKBP5Q13451 457 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-201ENST00000366813 TMEM164Q5U3C3 297 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 RGL4Q8IZJ4 473 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 TPSG1Q9NRR2 321 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
H3F3A-201ENST00000366813 PDE4CQ08493 712 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 COX20Q5RI15 118 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 TRAIPQ9BWF2 469 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
H3F3A-201ENST00000366813 CAMSAP2Q08AD1 1489 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms