RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 FNBP4Q8N3X1 1017 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 ARHGEF2Q92974 986 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 RNF10Q8N5U6 811 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 DTNBO60941 627 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 LRRD1A4D1F6 860 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 TUBB4AP04350 444 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 FAM71BQ8TC56 605 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 STMN4Q9H169 189 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 RASAL2Q9UJF2 1139 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 NUMA1Q14980 2115 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 MTHFSP49914 203 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
CDC42BPA-205ENST00000366769 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 GUCY2FP51841 1108 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 SMC6Q96SB8 1091 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 TTC14Q96N46 770 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 MYH9P35579 1960 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 GPR161Q8N6U8 529 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
CDC42BPA-205ENST00000366769 A0A087WUV0 522 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 KRT13P13646 458 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 IDEP14735 1019 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZMYM4Q5VZL5 1548 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 SYKP43405 635 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 PPP1R7Q15435 360 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 SND1Q7KZF4 910 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 RAB34Q9BZG1 259 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 TMEM51Q9NW97 253 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 PDHA1P08559 390 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 NLRP5P59047 1200 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
CDC42BPA-205ENST00000366769 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■■■■ 39.6
CDC42BPA-205ENST00000366769 TRIM7Q9C029 511 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 YY1AP1Q9H869 796 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 AKR1B10O60218 316 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 HAUS7Q99871 368 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 CASQ2O14958 399 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 CAPRIN2Q6IMN6 1127 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 CCDC174Q6PII3 467 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 HINFPQ9BQA5 517 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 ELP1O95163 1332 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 PPFIA1Q13136 1202 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 EEF2P13639 858 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 KRT32Q14532 448 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 MRPS27Q92552 414 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 KIF9Q9HAQ2 790 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 GMNNO75496 209 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 NAPBQ9H115 298 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
CDC42BPA-205ENST00000366769 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZBTB17Q13105 803 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 SPDL1Q96EA4 605 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 MED4Q9NPJ6 270 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 MYH11P35749 1972 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 SNX16P57768 344 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 ARID5AQ03989 594 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 CCDC122Q5T0U0 273 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 GSTA5Q7RTV2 222 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 TTC21AQ8NDW8 1320 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 GKAP1Q5VSY0 366 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 ZNF444Q8N0Y2 327 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 CRCPO75575 148 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 BRD3Q15059 726 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-205ENST00000366769 HIP1RO75146 1068 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms