RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 ETFBP38117 255 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 CRKP46108 304 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 RPS26P62854 115 aaKnown RBP6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 SERINC3Q13530 473 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 BMS1Q14692 1282 aaKnown RBP6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 HFE2Q6ZVN8 426 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 ASAP3Q8TDY4 903 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 STRIP2Q9ULQ0 834 aa6.84□□□□□ -1.31
RNU6-1339P-201ENST00000363574 CTBSQ01459 385 aa6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PCNX4Q63HM2 1172 aa6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ZNF746Q6NUN9 644 aaPredicted RBP6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 MUC3BQ9H195 1237 aa6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 MRVI1Q9Y6F6 885 aa6.83□□□□□ -1.32
RNU6-1339P-201ENST00000363574 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SDE2Q6IQ49 451 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 NKD1Q969G9 470 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TMEM39AQ9NV64 488 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 DNAJB12Q9NXW2 375 aaKnown RBP6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CDK11AQ9UQ88 783 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1339P-201ENST00000363574 K7ELQ4 463 aaPredicted RBP6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 KLF4O43474 513 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 GHRHP01286 108 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 NFE2L2Q16236 605 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 RASIP1Q5U651 963 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ADAMTSL4Q6UY14 1074 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 JAZF1Q86VZ6 243 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 NLGN1Q8N2Q7 840 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 UBE2OQ9C0C9 1292 aaKnown RBP6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 IGFLR1Q9H665 355 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PCDHB5Q9Y5E4 795 aa6.81□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ANKRD62A6NC57 917 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 F13A1P00488 732 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 BMP6P22004 513 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PCSK7Q16549 785 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CEP135Q66GS9 1140 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 BNC2Q6ZN30 1099 aaPredicted RBP6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SYT9Q86SS6 491 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 BSNDQ8WZ55 320 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 MKL1Q969V6 931 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 LRRC3Q9BY71 257 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CLEC4MQ9H2X3 399 aaPredicted RBP6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PRR12Q9ULL5 1215 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ROBO2Q9HCK4 1378 aa6.8□□□□□ -1.32
RNU6-1339P-201ENST00000363574 GPR25O00155 361 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 C2CD2LO14523 706 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SIN3BO75182 1162 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 B3GALT4O96024 378 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 EIF2AK2P19525 551 aaKnown RBP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TBC1D8BQ0IIM8 1120 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 RAB33AQ14088 237 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SEZ6Q53EL9 994 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CCDC84Q86UT8 332 aaPredicted RBP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CPLX3Q8WVH0 158 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 HNRNPLLQ8WVV9 542 aaKnown RBP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 GATAD2BQ8WXI9 593 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 KIFC2Q96AC6 838 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ANAPC16Q96DE5 110 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 MRFAP1L1Q96HT8 127 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SHDQ96IW2 340 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SRRTQ9BXP5 876 aaKnown RBP6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 RBSNQ9H1K0 784 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SOX13Q9UN79 622 aa6.79□□□□□ -1.32
RNU6-1339P-201ENST00000363574 FAM221AA4D161 298 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 NCLP19338 710 aaKnown RBP6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 NME2P22392 152 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 ZNF423Q2M1K9 1284 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 EGFLAMQ63HQ2 1017 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 CCDC81Q6ZN84 652 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 VN1R5Q7Z5H4 357 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TRIM47Q96LD4 638 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 TRERF1Q96PN7 1200 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 MIR1-1HGQ9H1L0 117 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PRKAG3Q9UGI9 489 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PPT2Q9UMR5 302 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 SAMM50Q9Y512 469 aa6.78□□□□□ -1.32
RNU6-1339P-201ENST00000363574 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1339P-201ENST00000363574 CPB1P15086 417 aa6.77□□□□□ -1.33
RNU6-1339P-201ENST00000363574 LMNB1P20700 586 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms