RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 NUTM2GQ5VZR2 741 aa2.59□□□□□ -1.99
RNU6-228P-201ENST00000362700 CDPF1Q6NVV7 123 aa2.59□□□□□ -1.99
RNU6-228P-201ENST00000362700 CYFIP1Q7L576 1253 aa2.59□□□□□ -1.99
RNU6-228P-201ENST00000362700 HMX1Q9NP08 348 aaPredicted RBP2.59□□□□□ -1.99
RNU6-228P-201ENST00000362700 LOC102724428A0A0B4J2F2 783 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 SERTM1A2A2V5 107 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 AP1G2O75843 785 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 SIK1P57059 783 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 SP8Q8IXZ3 490 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 SEC31BQ9NQW1 1179 aa2.58□□□□□ -2
RNU6-228P-201ENST00000362700 SCHIP1Q9P0W5 487 aaPredicted RBP2.58□□□□□ -2
RNU6-228P-201ENST00000362700 EPB42P16452 691 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 ADAM17P78536 824 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 MAP7Q14244 749 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 HIF1AQ16665 826 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 CYP27C1Q4G0S4 372 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 OXLD1Q5BKU9 147 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 EZH1Q92800 747 aaPredicted RBP2.57□□□□□ -2
RNU6-228P-201ENST00000362700 KLHDC7BQ96G42 594 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 CYP4F12Q9HCS2 524 aa2.57□□□□□ -2
RNU6-228P-201ENST00000362700 TMEM229AB2RXF0 380 aa2.56□□□□□ -2
RNU6-228P-201ENST00000362700 TARSP26639 723 aaKnown RBP2.56□□□□□ -2
RNU6-228P-201ENST00000362700 CDC27P30260 824 aa2.56□□□□□ -2
RNU6-228P-201ENST00000362700 IFI16Q16666 785 aaKnown RBP2.56□□□□□ -2
RNU6-228P-201ENST00000362700 FRMD5Q7Z6J6 570 aa2.56□□□□□ -2
RNU6-228P-201ENST00000362700 KCTD3Q9Y597 815 aa2.56□□□□□ -2
RNU6-228P-201ENST00000362700 C1QTNF3-AMACRE9PGA6 284 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 BACH1O14867 736 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 FZD7O75084 574 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 TIAF1O95411 115 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 NLRP12P59046 1061 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 DLG4P78352 724 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 ZP2Q05996 745 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 NR1H3Q13133 447 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 SH3PXD2AQ5TCZ1 1133 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 SMG8Q8ND04 991 aaKnown RBP2.55□□□□□ -2
RNU6-228P-201ENST00000362700 IFT43Q96FT9 208 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 LACRTQ9GZZ8 138 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 PCED1AQ9H1Q7 454 aa2.55□□□□□ -2
RNU6-228P-201ENST00000362700 TMEM265A0A087WTH1 108 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 FAM177BA6PVY3 158 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 INHBEP58166 350 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 IKZF1Q13422 519 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 RTP5Q14D33 572 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 OGFOD3Q6PK18 319 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 Q8N1X5 172 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 FAM181AQ8N9Y4 354 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 NSUN5Q96P11 429 aaKnown RBP2.54□□□□□ -2
RNU6-228P-201ENST00000362700 PHACTR1Q9C0D0 580 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 SUGCTQ9HAC7 445 aa2.54□□□□□ -2
RNU6-228P-201ENST00000362700 TLR7Q9NYK1 1049 aaKnown RBP2.54□□□□□ -2
RNU6-228P-201ENST00000362700 LOC100289279A0A1B0GTE1 492 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 SASH3O75995 380 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 USP17L8P0C7I0 530 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 ARHGAP27Q6ZUM4 889 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 SLC9A9Q8IVB4 645 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 POLR3EQ9NVU0 708 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 CEP126Q9P2H0 1117 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 CHMP3Q9Y3E7 222 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 HCN4Q9Y3Q4 1203 aa2.53□□□□□ -2
RNU6-228P-201ENST00000362700 PSAPP07602 524 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 NFICP08651 508 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 DRD2P14416 443 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 ITGB6P18564 788 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 TSGA10IPQ3SY00 556 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 SYT8Q8NBV8 401 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 C2CD4AQ8NCU7 369 aaPredicted RBP2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 DLL4Q9NR61 685 aa2.52□□□□□ -2.01
RNU6-228P-201ENST00000362700 RAB6AP20340 208 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 TBCELQ5QJ74 424 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 CPZQ66K79 652 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 PARP9Q8IXQ6 854 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 WNT8BQ93098 351 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 ZNF764Q96H86 408 aaPredicted RBP2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 TMPRSS13Q9BYE2 586 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 SMPD4Q9NXE4 827 aa2.51□□□□□ -2.01
RNU6-228P-201ENST00000362700 SEMA7AO75326 666 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 SMNDC1O75940 238 aaKnown RBP eCLIP2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 EPHA1P21709 976 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 PIP4K2BP78356 416 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 IER5Q5VY09 327 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 RSPH6AQ9H0K4 717 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 OSGEPQ9NPF4 335 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 C11orf16Q9NQ32 467 aa2.5□□□□□ -2.01
RNU6-228P-201ENST00000362700 SLC22A31A6NKX4 558 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 PRICKLE3O43900 615 aaPredicted RBP2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 CEACAM5P06731 702 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 GDNFP39905 211 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 AFF3P51826 1226 aaKnown RBP2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 HIRAP54198 1017 aaPredicted RBP2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 CEP135Q66GS9 1140 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 CRIP3Q6Q6R5 217 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 ASB11Q8WXH4 323 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 BRIP1Q9BX63 1249 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 TRIM34Q9BYJ4 488 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 MKNK2Q9HBH9 465 aa2.49□□□□□ -2.01
RNU6-228P-201ENST00000362700 CABP4P57796 275 aa2.48□□□□□ -2.01
RNU6-228P-201ENST00000362700 PSMA6P60900 246 aaKnown RBP2.48□□□□□ -2.01
RNU6-228P-201ENST00000362700 TGFB2P61812 414 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms