RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CTCFLQ8NI51 663 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-201ENST00000361866 KIAA1468Q9P260 1216 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 METP08581 1390 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 PRR36Q9H6K5 1346 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 TAF5LO75529 589 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 KRT18P05783 430 aaKnown RBP15.9■□□□□ 0.14
COL6A1-201ENST00000361866 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 GUCA1BQ9UMX6 200 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 E7EWF7 191 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 CYP21A2P08686 494 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 RDXP35241 583 aaKnown RBP15.9■□□□□ 0.14
COL6A1-201ENST00000361866 CCT6AP40227 531 aaKnown RBP15.9■□□□□ 0.14
COL6A1-201ENST00000361866 MTX1Q13505 466 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 IQCA1Q86XH1 822 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 PCDHA7Q9UN72 937 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-201ENST00000361866 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.14
COL6A1-201ENST00000361866 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.14
COL6A1-201ENST00000361866 ADKP55263 362 aaKnown RBP15.89■□□□□ 0.14
COL6A1-201ENST00000361866 RTN1Q16799 776 aa15.89■□□□□ 0.14
COL6A1-201ENST00000361866 KRBA2Q6ZNG9 492 aa15.89■□□□□ 0.14
COL6A1-201ENST00000361866 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.14
COL6A1-201ENST00000361866 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 NDUFA8P51970 172 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 LLPHQ9BRT6 129 aaKnown RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 DESI2Q9BSY9 194 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 FAM107BQ9H098 131 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 MAPK8IP1Q9UQF2 711 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 HSPA2P54652 639 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 STAMQ92783 540 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 KCNH3Q9ULD8 1083 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 POLR2DO15514 142 aaKnown RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 PNOCQ13519 176 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 DPCR1Q3MIW9 517 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
COL6A1-201ENST00000361866 NAA16Q6N069 864 aaPredicted RBP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL6A1-201ENST00000361866 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 MAP9Q49MG5 647 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 METTL22Q9BUU2 404 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 MTIF2P46199 727 aaKnown RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 GOLGA6L10A6NI86 522 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 DNAJC21Q5F1R6 531 aaKnown RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
COL6A1-201ENST00000361866 IQGAP3Q86VI3 1631 aa15.88■□□□□ 0.13
COL6A1-201ENST00000361866 TRIM21P19474 475 aaKnown RBP15.87■□□□□ 0.13
COL6A1-201ENST00000361866 NCBP1Q09161 790 aaKnown RBP15.87■□□□□ 0.13
COL6A1-201ENST00000361866 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
COL6A1-201ENST00000361866 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 MRFAP1L1Q96HT8 127 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 ELP1O95163 1332 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 NECTIN1Q15223 517 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 RABEP2Q9H5N1 569 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 CABP5Q9NP86 173 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 CTAGE9A4FU28 777 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 HOXB7P09629 217 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 IDEP14735 1019 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 USP5P45974 858 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 FKBP15Q5T1M5 1219 aa15.87■□□□□ 0.13
COL6A1-201ENST00000361866 ATP5JP18859 108 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 UBA7P41226 1012 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 ETF1P62495 437 aaKnown RBP15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CATIPQ7Z7H3 387 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 GPIHBP1Q8IV16 184 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 KRI1Q8N9T8 703 aaKnown RBP15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CLIC4Q9Y696 253 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 WDHD1O75717 1129 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-201ENST00000361866 PFKFB1P16118 471 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 ADALQ6DHV7 355 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 TRIM47Q96LD4 638 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 PLIN2Q99541 437 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 AK9Q5TCS8 1911 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 NEURL1BA8MQ27 555 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 A1BGP04217 495 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 LTKP29376 864 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CDR1P51861 262 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 NLRP12P59046 1061 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 IKQ13123 557 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-201ENST00000361866 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 GDAP1L1Q96MZ0 367 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 HELLSQ9NRZ9 838 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms