RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 PRC1O43663 620 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 AMIGO3Q86WK7 504 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 TRIM44Q96DX7 344 aaPredicted RBP13.72□□□□□ -0.21
HPS1-204ENST00000361490 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 E7EWF7 191 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
HPS1-204ENST00000361490 UFL1O94874 794 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 SERPINB2P05120 415 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
HPS1-204ENST00000361490 ZMYM1Q5SVZ6 1142 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 RBM5P52756 815 aaKnown RBP eCLIP13.71□□□□□ -0.21
HPS1-204ENST00000361490 TXNRD1Q16881 649 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 LRRC4BQ9NT99 713 aa13.71□□□□□ -0.21
HPS1-204ENST00000361490 AATFQ9NY61 560 aaKnown RBP eCLIP13.71□□□□□ -0.21
HPS1-204ENST00000361490 RXRBP28702 533 aa13.71□□□□□ -0.22
HPS1-204ENST00000361490 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.22
HPS1-204ENST00000361490 MPNDQ8N594 471 aa13.71□□□□□ -0.22
HPS1-204ENST00000361490 GPR108Q9NPR9 543 aa13.71□□□□□ -0.22
HPS1-204ENST00000361490 SH2B1Q9NRF2 756 aaPredicted RBP13.71□□□□□ -0.22
HPS1-204ENST00000361490 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 USP5P45974 858 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 SKOR2Q2VWA4 1001 aaPredicted RBP13.7□□□□□ -0.22
HPS1-204ENST00000361490 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
HPS1-204ENST00000361490 DHX32Q7L7V1 743 aaKnown RBP13.7□□□□□ -0.22
HPS1-204ENST00000361490 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 KLRK1P26718 216 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
HPS1-204ENST00000361490 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
HPS1-204ENST00000361490 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 MINPP1Q9UNW1 487 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
HPS1-204ENST00000361490 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
HPS1-204ENST00000361490 SYCE3A1L190 88 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 POLR3DP05423 398 aaPredicted RBP13.69□□□□□ -0.22
HPS1-204ENST00000361490 TMEM67Q5HYA8 995 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 MFSD6Q6ZSS7 791 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 MCM5P33992 734 aa13.69□□□□□ -0.22
HPS1-204ENST00000361490 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 ZNF609O15014 1411 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 PDCP20941 246 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 L1TD1Q5T7N2 865 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
HPS1-204ENST00000361490 CAMK4Q16566 473 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 DENND2AQ9ULE3 1009 aa13.68□□□□□ -0.22
HPS1-204ENST00000361490 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
HPS1-204ENST00000361490 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
HPS1-204ENST00000361490 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
HPS1-204ENST00000361490 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 MRC1P22897 1456 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
HPS1-204ENST00000361490 STOX1Q6ZVD7 989 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
HPS1-204ENST00000361490 ADD2P35612 726 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 TRIM29Q14134 588 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 ZNF804BA4D1E1 1349 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 COL18A1P39060 1754 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 PRDX5P30044 214 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
HPS1-204ENST00000361490 PICALMQ13492 652 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 AMOTL1Q8IY63 956 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
HPS1-204ENST00000361490 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
HPS1-204ENST00000361490 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 MMP10P09238 476 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 PTMSP20962 102 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 OLFM4Q6UX06 510 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 MCM9Q9NXL9 1143 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
HPS1-204ENST00000361490 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
HPS1-204ENST00000361490 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
HPS1-204ENST00000361490 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
HPS1-204ENST00000361490 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
HPS1-204ENST00000361490 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 GADD45BO75293 160 aaPredicted RBP13.65□□□□□ -0.22
HPS1-204ENST00000361490 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms