RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.34
DSC3-201ENST00000360428 TRMT112Q9UI30 125 aaKnown RBP6.65□□□□□ -1.34
DSC3-201ENST00000360428 ATP6V0A2Q9Y487 856 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 KLF18A0A0U1RQI7 1052 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 AKR1B15C9JRZ8 316 aaPredicted RBP6.65□□□□□ -1.35
DSC3-201ENST00000360428 INPP5BP32019 993 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 ASIC1P78348 528 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 MICU3Q86XE3 530 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 TMEM110-MUSTN1A8MSY1 372 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 GNAT2P19087 354 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 CCDC62Q6P9F0 684 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 PPP1R42Q7Z4L9 355 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 IFT20Q8IY31 132 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 RGS22Q8NE09 1264 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 IFT81Q8WYA0 676 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 C6orf50Q9HD87 102 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 PPP1R1BQ9UD71 204 aaPredicted RBP6.65□□□□□ -1.35
DSC3-201ENST00000360428 CCDC61Q9Y6R9 512 aa6.65□□□□□ -1.35
DSC3-201ENST00000360428 VIMP08670 466 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 RPL13P26373 211 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 GBP7Q8N8V2 638 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 NUDT16Q96DE0 195 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 TTF2Q9UNY4 1162 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 GRIN2BQ13224 1484 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 SPTLC2O15270 562 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 SH3BP5O60239 455 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 STMN1P16949 149 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 CLNS1AP54105 237 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 MCMDC2Q4G0Z9 681 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 GKAP1Q5VSY0 366 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 ANKLE2Q86XL3 938 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 PRPF31Q8WWY3 499 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 NUP58Q9BVL2 599 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 CRCPO75575 148 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TSPY3P0CV98 308 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TSPY8P0CW00 308 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 RASSF2P50749 326 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TRIM75PA6NK02 468 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 PTGS1P23219 599 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TERF1P54274 439 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 MTMR3Q13615 1198 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 MAP3K21Q5TCX8 1036 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 SRGAP1Q7Z6B7 1085 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 INTS4Q96HW7 963 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 NAPGQ99747 312 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 DNAJC25Q9H1X3 360 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 IMPACTQ9P2X3 320 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TSKSQ9UJT2 592 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 GUCA1BQ9UMX6 200 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 PLCB3Q01970 1234 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 PPFIA1Q13136 1202 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 INF2Q27J81 1249 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 SPATS2Q86XZ4 545 aaKnown RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 HVCN1Q96D96 273 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 CAPZA3Q96KX2 299 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 PANK2Q9BZ23 570 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 ERCC5P28715 1186 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 WDR78Q5VTH9 848 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 MCM10Q7L590 875 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 PPP1R9BQ96SB3 815 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 BAG1Q99933 345 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 VAT1LQ9HCJ6 419 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 RNF216Q9NWF9 866 aaPredicted RBP6.64□□□□□ -1.35
DSC3-201ENST00000360428 MAP3K2Q9Y2U5 619 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TACC3Q9Y6A5 838 aa6.64□□□□□ -1.35
DSC3-201ENST00000360428 TRIM27P14373 513 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 FLIIQ13045 1269 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 KRT79Q5XKE5 535 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 CYP26C1Q6V0L0 522 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 SYT10Q6XYQ8 523 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 NUTM2AQ8IVF1 878 aaPredicted RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 HAUS2Q9NVX0 235 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 DACT1Q9NYF0 836 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 ELP1O95163 1332 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 SATB1Q01826 763 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 RNF168Q8IYW5 571 aaPredicted RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 UBL4BQ8N7F7 174 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 ESYT1Q9BSJ8 1104 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 RALGAPBQ86X10 1494 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 RAD50Q92878 1312 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 TROQ12816 1431 aaPredicted RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 PBRM1Q86U86 1689 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 RHOXF2BP0C7M4 288 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 XRCC6P12956 609 aaKnown RBP eCLIP6.63□□□□□ -1.35
DSC3-201ENST00000360428 LGSNQ5TDP6 509 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 RNF10Q8N5U6 811 aaKnown RBP6.63□□□□□ -1.35
DSC3-201ENST00000360428 RHOXF2Q9BQY4 288 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 EVCP57679 992 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 CHMP4BP1P59074 171 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 ITIH3Q06033 890 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 RAB3GAP1Q15042 981 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 Q6ZUG5 572 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 CCDC65Q8IXS2 484 aa6.63□□□□□ -1.35
DSC3-201ENST00000360428 EPSTI1Q96J88 318 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms