RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HOOK1Q9UJC3 728 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 RNF113AO15541 343 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 CCP110O43303 1012 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 SEC31AO94979 1220 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 PNOCQ13519 176 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 IQCB1Q15051 598 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 NAA16Q6N069 864 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 PROSER2Q86WR7 435 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC12Q8WUD4 166 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 RCOR1Q9UKL0 485 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 TBX22Q9Y458 520 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 STX17P56962 302 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 EVCP57679 992 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 NCOA7Q8NI08 942 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 DDX17Q92841 729 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 KAZALD1Q96I82 304 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PPP1R13BQ96KQ4 1090 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 CLIC6Q96NY7 704 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 LZTFL1Q9NQ48 299 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 CWC25Q9NXE8 425 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 DDX41Q9UJV9 622 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 NRKQ7Z2Y5 1582 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 GOLGA8AA7E2F4 631 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PFKFB1P16118 471 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 ADD1P35611 737 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 MTX1Q13505 466 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 MCM6Q14566 821 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 ZNF827Q17R98 1081 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 ANO1Q5XXA6 986 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 KRT28Q7Z3Y7 464 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 TIGD1Q96MW7 591 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PUF60Q9UHX1 559 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 USP31Q70CQ4 1352 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 ZSCAN12O43309 604 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 CTIFO43310 598 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 IARSP41252 1262 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 AFMP43652 599 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 GABPB1Q06547 395 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PPFIBP1Q86W92 1011 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 ZKSCAN3Q9BRR0 538 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 LLPHQ9BRT6 129 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 DESI2Q9BSY9 194 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 PUS3Q9BZE2 481 aaKnown RBP7.58□□□□□ -1.2
CSDE1-203ENST00000358528 STRN4Q9NRL3 753 aa7.58□□□□□ -1.2
CSDE1-203ENST00000358528 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 A1BGP04217 495 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 TPM1P09493 284 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 ADKP55263 362 aaKnown RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 MYSM1Q5VVJ2 828 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 ADALQ6DHV7 355 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 DHX40Q8IX18 779 aaKnown RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.57□□□□□ -1.24e-11■□□□□ 9.7
CSDE1-203ENST00000358528 ERICH2A1L162 156 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 IFIT3O14879 490 aaKnown RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 LMAN1P49257 510 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 NEK11Q8NG66 645 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 HAUS7Q99871 368 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.57□□□□□ -1.29e-6■□□□□ 8.3
CSDE1-203ENST00000358528 CALCOCO1Q9P1Z2 691 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CLTCQ00610 1675 aaKnown RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 B4E1Z4 1266 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 TMEM67Q5HYA8 995 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 SLC9C2Q5TAH2 1124 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 TTLL7Q6ZT98 887 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 HELBQ8NG08 1087 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CCDC102AQ96A19 550 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 AIDAQ96BJ3 306 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CARMIL3Q8ND23 1372 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 PHACTR2O75167 634 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 NLRP12P59046 1061 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CCZ1BP86790 482 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CCZ1P86791 482 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 MYL5Q02045 173 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 TOM1L2Q6ZVM7 507 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 ANKLE2Q86XL3 938 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
CSDE1-203ENST00000358528 FAM89AQ96GI7 184 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 FANCLQ9NW38 375 aa7.57□□□□□ -1.2
CSDE1-203ENST00000358528 USP42Q9H9J4 1324 aaKnown RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 M0R2C6 588 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 IL15P40933 162 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 LDHAL6AQ6ZMR3 332 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 HELLSQ9NRZ9 838 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 MAST3O60307 1309 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 CDKL5O76039 1030 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ADORA1P30542 326 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ZAP70P43403 619 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 TDO2P48775 406 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 CLCN6P51797 869 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms