RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
RNF40-202ENST00000357890 FPGT-TNNI3KV9GXZ4 949 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
RNF40-202ENST00000357890 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.56
RNF40-202ENST00000357890 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.56
RNF40-202ENST00000357890 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.56
RNF40-202ENST00000357890 MYO1CO00159 1063 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.57
RNF40-202ENST00000357890 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
RNF40-202ENST00000357890 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 TOPAZ1Q8N9V7 1692 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 RGPD1P0DJD0 1748 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 CTAGE5O15320 804 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 ATP5JP18859 108 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
RNF40-202ENST00000357890 CHRNA2Q15822 529 aa11.52□□□□□ -0.57
RNF40-202ENST00000357890 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
RNF40-202ENST00000357890 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.57
RNF40-202ENST00000357890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.52□□□□□ -0.576e-7■■■■□ 20.7
RNF40-202ENST00000357890 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
RNF40-202ENST00000357890 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
RNF40-202ENST00000357890 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
RNF40-202ENST00000357890 ERLIN1O75477 346 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 TPM1P09493 284 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
RNF40-202ENST00000357890 TIMM10P62072 90 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 KARSQ15046 597 aaKnown RBP11.51□□□□□ -0.57
RNF40-202ENST00000357890 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 NFXL1Q6ZNB6 911 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 PLEKHA4Q9H4M7 779 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 CAVIN2O95810 425 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 C8orf76Q96K31 380 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 COPRSQ9NQ92 184 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
RNF40-202ENST00000357890 ERBB3P21860 1342 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 PIK3C2AO00443 1686 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 TOP1P11387 765 aaKnown RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 PHKG2P15735 406 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 ATP2B1P20020 1258 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 TRIM29Q14134 588 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 FTOQ9C0B1 505 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNF40-202ENST00000357890 TAF5LO75529 589 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 TAF6LQ9Y6J9 622 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 ST5P78524 1137 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 KIF4BQ2VIQ3 1234 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 CCDC158Q5M9N0 1113 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
RNF40-202ENST00000357890 DHX32Q7L7V1 743 aaKnown RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 CWC25Q9NXE8 425 aaPredicted RBP11.5□□□□□ -0.57
RNF40-202ENST00000357890 A0A1B0GVL5 298 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 OTUD7BQ6GQQ9 843 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
RNF40-202ENST00000357890 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 SYCP1Q15431 976 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 ZSCAN12O43309 604 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
RNF40-202ENST00000357890 GOLGA8BA8MQT2 603 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 CTR9Q6PD62 1173 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 CCDC150Q8NCX0 1101 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 PLBD2Q8NHP8 589 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 ELP1O95163 1332 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 C11orf57Q6ZUT1 292 aaPredicted RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 CHGBP05060 677 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 IVLP07476 585 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 CYP21A2P08686 494 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 CYP2C19P33261 490 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 RBM6P78332 1123 aaKnown RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 TOB2Q14106 344 aaPredicted RBP11.48□□□□□ -0.57
RNF40-202ENST00000357890 PRDM11Q9NQV5 511 aa11.48□□□□□ -0.57
RNF40-202ENST00000357890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■□□□□ 10.2
RNF40-202ENST00000357890 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
RNF40-202ENST00000357890 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
RNF40-202ENST00000357890 GIMAP7Q8NHV1 300 aa11.47□□□□□ -0.57
RNF40-202ENST00000357890 MRPS27Q92552 414 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms