RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ADAMTSL3P82987 1691 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 TPM4P67936 248 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
RTN4-204ENST00000357732 SLFNL1Q499Z3 407 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 CCAR2Q8N163 923 aaKnown RBP20.63■□□□□ 0.89
RTN4-204ENST00000357732 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 ERO1AQ96HE7 468 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
RTN4-204ENST00000357732 TJP1Q07157 1748 aa20.62■□□□□ 0.89
RTN4-204ENST00000357732 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
RTN4-204ENST00000357732 KIF18AQ8NI77 898 aa20.62■□□□□ 0.89
RTN4-204ENST00000357732 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
RTN4-204ENST00000357732 DDX41Q9UJV9 622 aaKnown RBP20.62■□□□□ 0.89
RTN4-204ENST00000357732 EYA2O00167 538 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 NRDCO43847 1150 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 IFIT1P09914 478 aaKnown RBP20.61■□□□□ 0.89
RTN4-204ENST00000357732 CABP4P57796 275 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 GABPB1Q06547 395 aaPredicted RBP20.61■□□□□ 0.89
RTN4-204ENST00000357732 AOPEPQ8N6M6 819 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 SDF4Q9BRK5 362 aa20.61■□□□□ 0.89
RTN4-204ENST00000357732 FTOQ9C0B1 505 aaKnown RBP eCLIP20.61■□□□□ 0.892e-14■□□□□ 10
RTN4-204ENST00000357732 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
RTN4-204ENST00000357732 FDPSP14324 419 aaKnown RBP20.6■□□□□ 0.89
RTN4-204ENST00000357732 ZNF397Q8NF99 534 aaPredicted RBP20.6■□□□□ 0.89
RTN4-204ENST00000357732 MORC2Q9Y6X9 1032 aaPredicted RBP20.6■□□□□ 0.89
RTN4-204ENST00000357732 PSDA5PKW4 1024 aaPredicted RBP20.6■□□□□ 0.89
RTN4-204ENST00000357732 CCDC191Q8NCU4 936 aa20.6■□□□□ 0.89
RTN4-204ENST00000357732 NCOA5Q9HCD5 579 aaKnown RBP20.6■□□□□ 0.89
RTN4-204ENST00000357732 ATF3P18847 181 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 STK38Q15208 465 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 IMMTQ16891 758 aaKnown RBP20.59■□□□□ 0.89
RTN4-204ENST00000357732 FILIP1Q7Z7B0 1213 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 SF3A1Q15459 793 aaKnown RBP20.59■□□□□ 0.89
RTN4-204ENST00000357732 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 C8orf76Q96K31 380 aa20.59■□□□□ 0.89
RTN4-204ENST00000357732 TIGD1Q96MW7 591 aa20.58■□□□□ 0.89
RTN4-204ENST00000357732 CCP110O43303 1012 aa20.58■□□□□ 0.88
RTN4-204ENST00000357732 NBPF11Q86T75 865 aa20.58■□□□□ 0.88
RTN4-204ENST00000357732 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 A0A1B0GUL7 405 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 USP27XA6NNY8 438 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 IKBKBO14920 756 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 SPTLC2O15270 562 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 NLRP12P59046 1061 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
RTN4-204ENST00000357732 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 ZNF592Q92610 1267 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 AKAP2Q9Y2D5 859 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 MYO1BO43795 1136 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 SLU7O95391 586 aaKnown RBP20.57■□□□□ 0.88
RTN4-204ENST00000357732 NDUFA8P51970 172 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 TIMM10P62072 90 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 ARID5BQ14865 1188 aa20.57■□□□□ 0.88
RTN4-204ENST00000357732 CMA1P23946 247 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 FAM193AP78312 1265 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 MYSM1Q5VVJ2 828 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 NAP1L2Q9ULW6 460 aaPredicted RBP20.56■□□□□ 0.88
RTN4-204ENST00000357732 NWD2Q9ULI1 1742 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 SLC3A2P08195 630 aaKnown RBP20.56■□□□□ 0.88
RTN4-204ENST00000357732 CCDC158Q5M9N0 1113 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 L2HGDHQ9H9P8 463 aa20.56■□□□□ 0.88
RTN4-204ENST00000357732 NEDD4P46934 1319 aa20.55■□□□□ 0.88
RTN4-204ENST00000357732 M0R2C6 588 aa20.55■□□□□ 0.88
RTN4-204ENST00000357732 FOSBP53539 338 aa20.55■□□□□ 0.88
RTN4-204ENST00000357732 SYNE3Q6ZMZ3 975 aa20.55■□□□□ 0.88
RTN4-204ENST00000357732 TTLL7Q6ZT98 887 aa20.55■□□□□ 0.88
RTN4-204ENST00000357732 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
RTN4-204ENST00000357732 A0A1B0GVL5 298 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 NCOA7Q8NI08 942 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 ZNF215Q9UL58 517 aaPredicted RBP20.54■□□□□ 0.88
RTN4-204ENST00000357732 SFPQP23246 707 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■□□ 15.5
RTN4-204ENST00000357732 DPCR1Q3MIW9 517 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 OSBP2Q969R2 916 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 CEP126Q9P2H0 1117 aa20.54■□□□□ 0.88
RTN4-204ENST00000357732 ORC3Q9UBD5 711 aaPredicted RBP20.54■□□□□ 0.88
RTN4-204ENST00000357732 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 PRC1O43663 620 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 ZNF202O95125 648 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 ANO1Q5XXA6 986 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 APPBP2Q92624 585 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
RTN4-204ENST00000357732 CPLX1O14810 134 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 KRT222Q8N1A0 295 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 XPO4Q9C0E2 1151 aaKnown RBP20.52■□□□□ 0.88
RTN4-204ENST00000357732 FAM53CQ9NYF3 392 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 GOLGA8BA8MQT2 603 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
RTN4-204ENST00000357732 CREBRFQ8IUR6 639 aa20.52■□□□□ 0.88
RTN4-204ENST00000357732 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 CPDO75976 1380 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms