RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ANKRD13DQ6ZTN6 518 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 F6X3S4 739 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 RBM10P98175 930 aaKnown RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 KIF5AQ12840 1032 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 PRPF31Q8WWY3 499 aaKnown RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 KDM6BO15054 1643 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 FANCAO15360 1455 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC171Q6TFL3 1326 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 ERICH4A6NGS2 130 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 M0QZ92 97 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CALML3P27482 149 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CYLC1P35663 651 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 URB2Q14146 1524 aaKnown RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 PSMA7O14818 248 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 GMNNO75496 209 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 DDIT3P35638 169 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 ZSCAN16Q9H4T2 348 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 PSMC4P43686 418 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 KMT5BQ4FZB7 885 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 KRT79Q5XKE5 535 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CDCA7Q9BWT1 371 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 MAK16Q9BXY0 300 aaKnown RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 TXNDC16Q9P2K2 825 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 IL15P40933 162 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CFAP58Q5T655 872 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 LMTK3Q96Q04 1460 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 KLF18A0A0U1RQI7 1052 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CHRNA2Q15822 529 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 CNBD1Q8NA66 436 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 GABPB2Q8TAK5 448 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 HAUS7Q99871 368 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 FAM169AQ9Y6X4 670 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 EIF6P56537 245 aaKnown RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 HS2ST1Q7LGA3 356 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 A2MP01023 1474 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
PTPRD-202ENST00000356435 GNA11P29992 359 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 SMC1BQ8NDV3 1235 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 SSH1Q8WYL5 1049 aa6.26□□□□□ -1.41
PTPRD-202ENST00000356435 SYNMO15061 1565 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 BIN1O00499 593 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 GABPB1Q06547 395 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 KIF22Q14807 665 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 DZIP3Q86Y13 1208 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 KCNG4Q8TDN1 519 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 FBF1Q8TES7 1133 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 MKRN1Q9UHC7 482 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 NLRP1Q9C000 1473 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ALDH1L1O75891 902 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 KRT2P35908 639 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SMTNP53814 917 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 TPD52P55327 224 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CFAP157Q5JU67 520 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SKAP1Q86WV1 359 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SIRT1Q96EB6 747 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CACYBPQ9HB71 228 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ARHGAP31Q2M1Z3 1444 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 PARP1P09874 1014 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 RNF34Q969K3 372 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 RBM28Q9NW13 759 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 PCDHB15Q9Y5E8 787 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 STK24Q9Y6E0 443 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 KIAA0556O60303 1618 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SYKP43405 635 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 TRAPPC3LQ5T215 181 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SUPT20HQ8NEM7 779 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CCT6BQ92526 530 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 JAKMIP2Q96AA8 810 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 NOL3O60936 208 aaKnown RBP6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CDAN1Q8IWY9 1227 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 RAPGEF6Q8TEU7 1601 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 GNPATO15228 680 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 PDE6BP35913 854 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CBX1P83916 185 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 RAB11FIP4Q86YS3 637 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SLC5A4Q9NY91 659 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 EXOC7Q9UPT5 735 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ATP6V0A2Q9Y487 856 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SEC24BO95487 1268 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 TTC6Q86TZ1 520 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 TICAM2Q86XR7 235 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 MYRIPQ8NFW9 859 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 KIFAP3Q92845 792 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 TMX1Q9H3N1 280 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ADAMTS12P58397 1594 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ACEP12821 1306 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 NUCB1Q02818 461 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 SERPINA10Q9UK55 444 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 ZBTB21Q9ULJ3 1066 aa6.25□□□□□ -1.41
PTPRD-202ENST00000356435 CEBPAP49715 358 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 MCM9Q9NXL9 1143 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 TMEM110-MUSTN1A8MSY1 372 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 VIMP08670 466 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms