RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 RHOXF2BP0C7M4 288 aa15.72■□□□□ 0.11
TRIM4-203ENST00000355947 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
TRIM4-203ENST00000355947 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
TRIM4-203ENST00000355947 RHOXF2Q9BQY4 288 aa15.72■□□□□ 0.11
TRIM4-203ENST00000355947 FHOD1Q9Y613 1164 aa15.72■□□□□ 0.11
TRIM4-203ENST00000355947 PFKFB2O60825 505 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 ADD1P35611 737 aaKnown RBP15.71■□□□□ 0.11
TRIM4-203ENST00000355947 RBM43Q6ZSC3 357 aaKnown RBP15.71■□□□□ 0.11
TRIM4-203ENST00000355947 TTC5Q8N0Z6 440 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 CCDC102AQ96A19 550 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 OVOS2A0A0J9YW53 1432 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 OVOS2Q6IE36 1432 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 TRIM66O15016 1216 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 RABEP2Q9H5N1 569 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 VPS18Q9P253 973 aa15.71■□□□□ 0.11
TRIM4-203ENST00000355947 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
TRIM4-203ENST00000355947 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
TRIM4-203ENST00000355947 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 COL15A1P39059 1388 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 DLC1Q96QB1 1528 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 PRC1O43663 620 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 GCKRQ14397 625 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 SMC1AQ14683 1233 aaKnown RBP15.7■□□□□ 0.1
TRIM4-203ENST00000355947 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 GDAP1L1Q96MZ0 367 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 WDR24Q96S15 920 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 FOXN1O15353 648 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 GRAMD1CQ8IYS0 662 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 IL17RAQ96F46 866 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
TRIM4-203ENST00000355947 KCNA6P17658 529 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 FAM193AP78312 1265 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 PPP2R3AQ06190 1150 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 PI16Q6UXB8 463 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-203ENST00000355947 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 NAA16Q6N069 864 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-203ENST00000355947 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 ZNF609O15014 1411 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 ERBB3P21860 1342 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
TRIM4-203ENST00000355947 PDIA4P13667 645 aaKnown RBP15.69■□□□□ 0.1
TRIM4-203ENST00000355947 CAPN2P17655 700 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 ADALQ6DHV7 355 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 LINC00301Q8NCQ3 95 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 ENGASEQ8NFI3 743 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
TRIM4-203ENST00000355947 UBE2Q2LH0YL09 131 aa15.68■□□□□ 0.1
TRIM4-203ENST00000355947 ILDR1Q86SU0 546 aaPredicted RBP15.68■□□□□ 0.1
TRIM4-203ENST00000355947 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
TRIM4-203ENST00000355947 MTF1Q14872 753 aa15.68■□□□□ 0.1
TRIM4-203ENST00000355947 AKAP4Q5JQC9 854 aa15.68■□□□□ 0.1
TRIM4-203ENST00000355947 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
TRIM4-203ENST00000355947 NLRP12P59046 1061 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 ZSCAN26Q16670 478 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 ANO1Q5XXA6 986 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 CMTR1Q8N1G2 835 aaKnown RBP15.67■□□□□ 0.1
TRIM4-203ENST00000355947 KCNB2Q92953 911 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 KDRP35968 1356 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 ATP5JP18859 108 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 PPARDQ03181 441 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 TRDNQ13061 729 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 TRIM29Q14134 588 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 DDX21Q9NR30 783 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIM4-203ENST00000355947 PPP2R2CQ9Y2T4 447 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
TRIM4-203ENST00000355947 PTPN12Q05209 780 aaKnown RBP15.67■□□□□ 0.1
TRIM4-203ENST00000355947 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 TOGARAM2Q6ZUX3 1019 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 KBTBD3Q8NAB2 608 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 RAPGEF4Q8WZA2 1011 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 DHX58Q96C10 678 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 BAG1Q99933 345 aaPredicted RBP15.67■□□□□ 0.1
TRIM4-203ENST00000355947 PHF8Q9UPP1 1060 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
TRIM4-203ENST00000355947 FDPSP14324 419 aaKnown RBP15.66■□□□□ 0.1
TRIM4-203ENST00000355947 MYL5Q02045 173 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 STAMQ92783 540 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
TRIM4-203ENST00000355947 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 ZSCAN12O43309 604 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
TRIM4-203ENST00000355947 SASH3O75995 380 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 CYP2C19P33261 490 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 AFMP43652 599 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
TRIM4-203ENST00000355947 IDH1O75874 414 aaKnown RBP15.66■□□□□ 0.1
TRIM4-203ENST00000355947 HMGB1P09429 215 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms